Evidence map›Paper›PMID 21080425›Full record

ArticleProtein science : a publication of the Protein Society2011

Highly efficient purification of protein complexes from mammalian cells using a novel streptavidin-binding peptide and hexahistidine tandem tag system: application to Bruton's tyrosine kinase.

Yifeng Li, Sarah Franklin, Michael J Zhang, Thomas M Vondriska

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 30 citations in OpenAlex.

  1. Other Techniques.Advances in biochemical engineering/biotechnology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yifeng LiDepartment of Anesthesiology, David Geffen School of Medicine, University of California, Los Angeles, CA 90095, USA.
Sarah Franklin
Michael J Zhang
Thomas M Vondriska
University of California, Los Angeles · US

Funding

Dynamics of Cardiac Nuclei in Heart DiseaseR01HL105699 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI VONDRISKA, THOMAS M. · 2011 to 2025
$5.0M
Novel mechanisms of tyrosine kinase signaling in heartR01HL087132 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI VONDRISKA, THOMAS M. · 2007 to 2011
$2.3M
PURCHASE OF PROTEOMIC MASS SPECTROMETRY INSTRUMENTATION: CARDIOLOGYS10RR022371 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI VONDRISKA, THOMAS MARTIN · 2006 to 2006
$498k
Phenotypic Continuum Between Cardiac Growth and ProtectionR21HL096041 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI VONDRISKA, THOMAS M. · 2009 to 2010
$424k
NCRR NIH HHS S10 RR022371NHLBI NIH HHS R01 HL087132NHLBI NIH HHS R01 HL105699NHLBI NIH HHS R21 HL096041
6 · The paper itself

Abstract

Tandem affinity purification (TAP) is a generic approach for the purification of protein complexes. The key advantage of TAP is the engineering of dual affinity tags that, when attached to the protein of interest, allow purification of the target protein along with its binding partners through two consecutive purification steps. The tandem tag used in the original method consists of two IgG-binding units of protein A from Staphylococcus aureus (ProtA) and the calmodulin-binding peptide (CBP), and it allows for recovery of 20-30% of the bait protein in yeast. When applied to higher eukaryotes, however, this classical TAP tag suffers from low yields. To improve protein recovery in systems other than yeast, we describe herein the development of a three-tag system comprised of CBP, streptavidin-binding peptide (SBP) and hexa-histidine. We illustrate the application of this approach for the purification of human Bruton's tyrosine kinase (Btk), which results in highly efficient binding and elution of bait protein in both purification steps (>50% recovery). Combined with mass spectrometry for protein identification, this TAP strategy facilitated the first nonbiased analysis of Btk interacting proteins. The high efficiency of the SBP-His₆ purification allows for efficient recovery of protein complexes formed with a target protein of interest from a small amount of starting material, enhancing the ability to detect low abundance and transient interactions in eukaryotic cell systems.

Indexed as

Agammaglobulinaemia Tyrosine KinaseCarrier ProteinsChromatography, AffinityHEK293 CellsHistidineHumansMultiprotein ComplexesOligopeptidesProtein-Tyrosine KinasesRecombinant Fusion ProteinsAgammaglobulinaemia Tyrosine KinaseBTK protein, humanCarrier ProteinsHis-His-His-His-His-HisHistidineMultiprotein ComplexesOligopeptidesProtein-Tyrosine KinasesRecombinant Fusion Proteinsstreptavidin-binding peptide

Identifiers

PMID21080425
PMCPMC3047070
OpenAlexW1870389534

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.