Evidence map›Paper›PMID 21079777›Full record

ArticlePloS one2010

ATP changes the fluorescence lifetime of cyan fluorescent protein via an interaction with His148.

Jan Willem Borst, Marieke Willemse, Rik Slijkhuis, Gerard van der Krogt, Sergey P Laptenok, Kees Jalink, Be Wieringa, Jack A M Fransen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Single-Molecule Imaging in Living Plant Cells: A Methodological Review.International journal of molecular sciences · 2021
    Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Jan Willem BorstLaboratory of Biochemistry, Microspectroscopy Centre, Wageningen University, Wageningen, The Netherlands.
Marieke Willemse
Rik Slijkhuis
Gerard van der Krogt
Sergey P Laptenok
Kees Jalink
Be Wieringa
Jack A M Fransen
Wageningen University & Research · NLRadboud University Nijmegen · NLThe Netherlands Cancer Institute · NLRadboud University Medical Center · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, we described that ATP induces changes in YFP/CFP fluorescence intensities of Fluorescence Resonance Energy Transfer (FRET) sensors based on CFP-YFP. To get insight into this phenomenon, we employed fluorescence lifetime spectroscopy to analyze the influence of ATP on these fluorescent proteins in more detail. Using different donor and acceptor pairs we found that ATP only affected the CFP-YFP based versions. Subsequent analysis of purified monomers of the used proteins showed that ATP has a direct effect on the fluorescence lifetime properties of CFP. Since the fluorescence lifetime analysis of CFP is rather complicated by the existence of different lifetimes, we tested a variant of CFP, i.e. Cerulean, as a monomer and in our FRET constructs. Surprisingly, this CFP variant shows no ATP concentration dependent changes in the fluorescence lifetime. The most important difference between CFP and Cerulean is a histidine residue at position 148. Indeed, changing this histidine in CFP into an aspartic acid results in identical fluorescence properties as observed for the Cerulean fluorescent based FRET sensor. We therefore conclude that the changes in fluorescence lifetime of CFP are affected specifically by possible electrostatic interactions of the negative charge of ATP with the positively charged histidine at position 148. Clearly, further physicochemical characterization is needed to explain the sensitivity of CFP fluorescence properties to changes in environmental (i.e. ATP concentrations) conditions.

Indexed as

Adenosine TriphosphateAnimalsChemical PhenomenaChlorocebus aethiopsCOS CellsFluorescenceFluorescence PolarizationFluorescence Resonance Energy TransferGreen Fluorescent ProteinsHistidineLuminescent ProteinsProtein BindingTime FactorsAdenosine TriphosphateCyan Fluorescent ProteinGreen Fluorescent ProteinsHistidineLuminescent Proteins

Identifiers

PMID21079777
PMCPMC2974648
OpenAlexW2129451979

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.