Evidence map›Paper›PMID 21079681›Full record

ArticlePLoS genetics2010

Human-specific evolution and adaptation led to major qualitative differences in the variable receptors of human and chimpanzee natural killer cells.

Laurent Abi-Rached, Achim K Moesta, Raja Rajalingam, Lisbeth A Guethlein, Peter Parham

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 87 citations in OpenAlex.

  1. Review
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  3. TheFrontiers in immunology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Laurent Abi-RachedDepartment of Structural Biology, Stanford University School of Medicine, Stanford, California, United States of America.
Achim K Moesta
Raja Rajalingam
Lisbeth A Guethlein
Peter Parham
Stanford University · USUniversity of California, Los Angeles · US

Funding

YNPRC NHP CLINICAL MEDICINE RESIDENCY PROGRAM - SUPPLEMENTP51RR000165 · NCRR · EMORY UNIVERSITY · PI ALTMAN, JOHN DAVID · 1985 to 2011
$114.0M
MOLECULAR &CELLULAR IMMUNOBIOLOGYT32AI007290 · NIAID · STANFORD UNIVERSITY · PI Sean Curtis Bendall, Olivia M Martinez · 1985 to 2026
$27.0M
THE NATURE AND FUNCTION OF HLA-A,B,C POLYMORPHISMR01AI024258 · NIAID · STANFORD UNIVERSITY · PI PARHAM, PETER R · 1986 to 2020
$5.3M
INTERACTIONS BETWEEN HLA CLASS I &CYTOLYTIC LYMPHOCYTESR01AI022039 · NIAID · STANFORD UNIVERSITY · PI PARHAM, PETER R · 1985 to 2017
$5.2M
THE NATURE OF HLA-A, B, C POLYMORPHISMR55AI024258 · NIAID · STANFORD UNIVERSITY · PI PARHAM, PETER R · 1991 to 1991
–
NCRR NIH HHS P51 RR000165NCRR NIH HHS RR000165NIAID NIH HHS AI22039NIAID NIH HHS AI24258NIAID NIH HHS R01 AI022039NIAID NIH HHS R01 AI024258NIAID NIH HHS T32 AI007290
6 · The paper itself

Abstract

Natural killer (NK) cells serve essential functions in immunity and reproduction. Diversifying these functions within individuals and populations are rapidly-evolving interactions between highly polymorphic major histocompatibility complex (MHC) class I ligands and variable NK cell receptors. Specific to simian primates is the family of Killer cell Immunoglobulin-like Receptors (KIR), which recognize MHC class I and associate with a range of human diseases. Because KIR have considerable species-specificity and are lacking from common animal models, we performed extensive comparison of the systems of KIR and MHC class I interaction in humans and chimpanzees. Although of similar complexity, they differ in genomic organization, gene content, and diversification mechanisms, mainly because of human-specific specialization in the KIR that recognizes the C1 and C2 epitopes of MHC-B and -C. Humans uniquely focused KIR recognition on MHC-C, while losing C1-bearing MHC-B. Reversing this trend, C1-bearing HLA-B46 was recently driven to unprecedented high frequency in Southeast Asia. Chimpanzees have a variety of ancient, avid, and predominantly inhibitory receptors, whereas human receptors are fewer, recently evolved, and combine avid inhibitory receptors with attenuated activating receptors. These differences accompany human-specific evolution of the A and B haplotypes that are under balancing selection and differentially function in defense and reproduction. Our study shows how the qualitative differences that distinguish the human and chimpanzee systems of KIR and MHC class I predominantly derive from adaptations on the human line in response to selective pressures placed on human NK cells by the competing needs of defense and reproduction.

Indexed as

Biological EvolutionAdaptation, PhysiologicalAnimalsAsia, SoutheasternEpitopesHaplotypesHistocompatibility AntigensHLA-B AntigensHumansKiller Cells, NaturalLigandsPan troglodytesPhylogenyProtein Structure, TertiaryReceptors, KIRRecombination, GeneticEpitopesHistocompatibility AntigensHLA-B46 antigenHLA-B AntigensLigandsReceptors, KIR

Identifiers

PMID21079681
PMCPMC2973822
OpenAlexW2017567155

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.