Evidence map›Paper›PMID 21078995›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Conserved mechanism for sensor phosphatase control of two-component signaling revealed in the nitrate sensor NarX.

TuAnh Ngoc Huynh, Chris E Noriega, Valley Stewart

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

  1. Article
  2. Review
  3. AProceedings of the National Academy of Sciences of the United States of America · 2025
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  6. ThemBio · 2025
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  11. Marginal specificity in protein interactions constrains evolution of a paralogous family.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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  15. Real-time detection of response regulator phosphorylation dynamics in live bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

TuAnh Ngoc HuynhDepartment of Microbiology, University of California, Davis, CA 95616-8665, USA.
Chris E Noriega
Valley Stewart

Funding

GENETIC CONTROL OF NITRATE RESPIRATION IN E. COLIR01GM036877 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI STEWART, VALLEY J. · 1986 to 2010
$2.4M
NIGMS NIH HHS GM036877NIGMS NIH HHS R01 GM036877
6 · The paper itself

Abstract

Two-component signal transduction mediates a wide range of phenotypes in microbes and plants. The sensor transmitter module controls the phosphorylation state of the cognate-response-regulator receiver domain. Whereas the two-component autokinase and phosphotransfer reactions are well-understood, the mechanism by which sensors accelerate the rate of phospho-response regulator dephosphorylation, termed "transmitter phosphatase activity," is unknown. We identified a conserved DxxxQ motif adjacent to the phospho-accepting His residue in the HisKA_3 subfamily of two-component sensors. We used site-specific mutagenesis to make substitutions for these conserved Gln and Asp residues in the nitrate-responsive NarX sensor and analyzed function both in vivo and in vitro. Results show that the Gln residue is critical for transmitter phosphatase activity, but is not essential for autokinase or phosphotransfer activities. The documented role of an amide moiety in phosphoryl group hydrolysis suggests an analogous catalytic function for this Gln residue in HisKA_3 members. Results also indicate that the Asp residue is important for both autokinase and transmitter phosphatase activities. Furthermore, we noted that sensors of the HisKA subfamily exhibit an analogous E/DxxT/N motif, the conserved Thr residue of which is critical for transmitter phosphatase activity of the EnvZ sensor. Thus, two-component sensors likely use similar mechanisms for receiver domain dephosphorylation.

Indexed as

NitratesSignal TransductionAmino Acid MotifsBacterial Outer Membrane ProteinsEscherichia coli ProteinsHistidine KinaseMultienzyme ComplexesMutagenesis, Site-DirectedPhosphoric Monoester HydrolasesPhosphorylationProtein KinasesBacterial Outer Membrane ProteinsenvZ protein, E coliEscherichia coli ProteinsHistidine KinaseMultienzyme ComplexesnarX protein, E coliNitratesPhosphoric Monoester HydrolasesProtein Kinases

Identifiers

PMID21078995
PMCPMC3000247

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.