Evidence map›Paper›PMID 21078952›Full record

ArticleAntimicrobial agents and chemotherapy2011

Determinants of individual variation in intracellular accumulation of anti-HIV nucleoside analog metabolites.

Elijah Paintsil, Ginger E Dutschman, Rong Hu, Susan P Grill, Chuan-Jen Wang, Wing Lam, Fang-Yong Li, Musie Ghebremichael, Veronika Northrup, Yung-Chi Cheng

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Elijah PaintsilDepartment of Pediatrics, Yale University School of Medicine, New Haven, CT 06520, USA. elijah.paintsil@yale.edu
Ginger E Dutschman
Rong Hu
Susan P Grill
Chuan-Jen Wang
Wing Lam
Fang-Yong Li
Musie Ghebremichael
Veronika Northrup
Yung-Chi Cheng
Yale University · USHarvard University · US

Funding

BIOCHEMICAL PHARMACOLOGY OF ANTIHIV COMPOUNDSR01AI038204 · NIAID · YALE UNIVERSITY · PI CHENG, YUNG-CHI · 1995 to 2014
$5.2M
Developmental Adaptation: Child Health Research CenterK12HD001401 · NICHD · YALE UNIVERSITY · PI BOGUE, CLIFFORD W · 2001 to 2015
$4.2M
HIV Nucleoside Analogs Translational Studies: Resistance and MetabolismK08AI074404 · NIAID · YALE UNIVERSITY · PI PAINTSIL, ELIJAH · 2008 to 2012
$629k
NIAID NIH HHS AI-38204NIAID NIH HHS K08 AI074404NIAID NIH HHS K08AI074404NIAID NIH HHS R01 AI038204NIAID NIH HHS R56 AI038204NICHD NIH HHS K12 HD001401NICHD NIH HHS K12HD001401-08
6 · The paper itself

Abstract

Individual variation in response to antiretroviral therapy is well-known, but it is not clear if demographic characteristics such as gender, age, and ethnicity are responsible for the variation. To optimize anti-HIV therapy and guide antiretroviral drug discovery, determinants that cause variable responses to therapy need to be evaluated. We investigated the determinants of intracellular concentrations of nucleoside analogs using peripheral blood mononuclear cells from 40 healthy donors. We observed individual differences in the concentrations of the intracellular nucleoside analogs; the mean concentrations of the triphosphate metabolite of ethynylstavudine (4'-Ed4T), zidovudine (AZT), and lamivudine (3TC) were 0.71 pmol/10(6) cells (minimum and maximum, 0.10 and 3.00 pmol/10(6) cells, respectively), 0.88 pmol/10(6) cells (minimum and maximum, 0.10 and 15.18 pmol/10(6) cells, respectively), and 1.70 pmol/10(6) cells (minimum and maximum, 0.20 and 7.73 pmol/10(6) cells, respectively). Gender and ethnicity had no effect on the concentration of 4'-Ed4T and 3TC metabolites. There was a trend for moderation of the concentrations of AZT metabolites by gender (P = 0.17 for gender·metabolite concentration). We observed variability in the activity and expression of cellular kinases. There was no statistically significant correlation between thymidine kinase 1 (TK-1) activity or expression and thymidine analog metabolite concentrations. The correlation between the activity of deoxycytidine kinase (dCK) and the 3TC monophosphate metabolite concentration showed a trend toward significance (P = 0.1). We observed an inverse correlation between the multidrug-resistant protein 2 (MRP2) expression index and the concentrations of AZT monophosphate, AZT triphosphate, and total AZT metabolites. Our findings suggest that the observed variation in clinical response to nucleoside analogs may be due partly to the individual differences in the intracellular concentrations, which in turn may be affected by the cellular kinases involved in the phosphorylation pathway and ATP-binding cassette (ABC) transport proteins.

Indexed as

Anti-HIV AgentsCD4-Positive T-LymphocytesCross-Sectional StudiesDeoxycytidine KinaseFemaleHIV SeronegativityHumansLamivudineLeukocytes, MononuclearLymphocyte ActivationMaleNucleosidesPolyphosphatesSex FactorsStavudineThymidine Kinase4'-ethynylstavudineAnti-HIV AgentsDeoxycytidine KinaseLamivudineNucleosidesPolyphosphatesStavudineThymidine Kinasethymidine kinase 1triphosphoric acidZidovudine

Identifiers

PMID21078952
PMCPMC3028801
OpenAlexW2172250655

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.