Evidence map›Paper›PMID 21078668›Full record

ArticleThe Journal of biological chemistry2011

Identification of residues within tropomodulin-1 responsible for its localization at the pointed ends of the actin filaments in cardiac myocytes.

Takehiro Tsukada, Lucy Kotlyanskaya, Robert Huynh, Brinda Desai, Stefanie M Novak, Andrey V Kajava, Carol C Gregorio, Alla S Kostyukova

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. A nemaline myopathy-linked mutation inhibits the actin-regulatory functions of tropomodulin and leiomodin.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. A human FLII gene variant alters sarcomeric actin thin filament length and predisposes to cardiomyopathy.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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  8. Role of intrinsic disorder in muscle sarcomeres.Progress in molecular biology and translational science · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Takehiro TsukadaDepartment of Cell Biology and Anatomy and the Molecular Cardiovascular Research Program, University of Arizona, Tucson, Arizona 85724, USA.
Lucy Kotlyanskaya
Robert Huynh
Brinda Desai
Stefanie M Novak
Andrey V Kajava
Carol C Gregorio
Alla S Kostyukova
Johnson University · USUniversity of Arizona · USCentre National de la Recherche Scientifique · FR

Funding

University of Arizona's Initiatives to Maximize Student DiversityR25GM062584 · NIGMS · UNIVERSITY OF ARIZONA · PI TAX, FRANS E · 2001 to 2017
$7.2M
Deciphering the Roles of Nebulin in Cardiac Myofibril AssemblyR01HL083146 · NHLBI · UNIVERSITY OF ARIZONA · PI GREGORIO, CAROL C · 2007 to 2011
$2.1M
Factors influencing regulation of the dynamics of the actin filament pointed endR01GM081688 · NIGMS · WASHINGTON STATE UNIVERSITY · PI KOSTYUKOVA, ALLA S. · 2009 to 2013
$1.6M
NHLBI NIH HHS HL083146NHLBI NIH HHS R01 HL083146NIGMS NIH HHS 5R25GM62584NIGMS NIH HHS GM081688NIGMS NIH HHS R01 GM081688NIGMS NIH HHS R25 GM062584
6 · The paper itself

Abstract

Tropomodulin is a tropomyosin-dependent actin filament capping protein involved in the structural formation of thin filaments and in the regulation of their lengths through its localization at the pointed ends of actin filaments. The disordered N-terminal domain of tropomodulin contains three functional sites: two tropomyosin-binding and one tropomyosin-dependent actin-capping sites. The C-terminal half of tropomodulin consists of one compact domain containing a tropomyosin-independent actin-capping site. Here we determined the structural properties of tropomodulin-1 that affect its roles in cardiomyocytes. To explore the significance of individual tropomyosin-binding sites, GFP-tropomodulin-1 with single mutations that destroy each tropomyosin-binding site was expressed in cardiomyocytes. We demonstrated that both sites are necessary for the optimal localization of tropomodulin-1 at thin filament pointed ends, with site 2 acting as the major determinant. To investigate the functional properties of the tropomodulin C-terminal domain, truncated versions of GFP-tropomodulin-1 were expressed in cardiomyocytes. We discovered that the leucine-rich repeat (LRR) fold and the C-terminal helix are required for its proper targeting to the pointed ends. To investigate the structural significance of the LRR fold, we generated three mutations within the C-terminal domain (V232D, F263D, and L313D). Our results show that these mutations affect both tropomyosin-independent actin-capping activity and pointed end localization, most likely by changing local conformations of either loops or side chains of the surfaces involved in the interactions of the LRR domain. Studying the influence of these mutations individually, we concluded that, in addition to the tropomyosin-independent actin-capping site, there appears to be another regulatory site within the tropomodulin C-terminal domain.

Indexed as

Actin CytoskeletonAmino Acid SequenceAnimalsBinding SitesCells, CulturedMyocytes, CardiacPeptide MappingProtein FoldingRatsSequence DeletionTropomodulinTmod1 protein, ratTropomodulin

Identifiers

PMID21078668
PMCPMC3023515
OpenAlexW2085618979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.