Evidence map›Paper›PMID 21078375›Full record

ArticleGene2011

NF-Y and USF1 transcription factor binding to CCAAT-box and E-box elements activates the CP27 promoter.

Yoshihiro Ito, Youbin Zhang, Smit Dangaria, Xianghong Luan, Thomas G H Diekwisch

Abstract read
In one paragraph

Article in Gene, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  3. The True Story ofFrontiers in physiology · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yoshihiro ItoBrodie Laboratory for Craniofacial Genetics, University of Illinois at Chicago, 801 South Paulina Street, Chicago, IL 60612, USA.
Youbin Zhang
Smit Dangaria
Xianghong Luan
Thomas G H Diekwisch
University of Illinois Chicago · US

Funding

CP 27 GENE FUNCTION IN TOOTH DEVELOPMENTR01DE013095 · NIDCR · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DIEKWISCH, THOMAS G.H. · 2001 to 2004
$1.1M
NIDCR NIH HHS R01 DE013095
6 · The paper itself

Abstract

The maintenance and differentiation of embryonic stem cells (ES cells) depends on the regulation of gene expression through the coordinated binding of transcription factors to regulatory promoter elements. One of the genes involved in embryonic development is the chromatin factor CP27. Previously, we have shown that NF-Y interacted with the CP27 proximal promoter CCAAT-box. Here we report that CP27 gene expression in mouse ES cells is controlled by CCAAT and E-box cis-acting regulatory elements and their corresponding transcription factors NF-Y and USF1. Specifically, USF1 interacts with the E-box of the CP27 proximal promoter and NF-Y interacts with the CCAAT-box. NF-Y and USF1 also interacted with each other and activated the CP27 promoter in a synergistic fashion. Together, these studies demonstrate that gene expression of the chromatin factor CP27 is regulated through the interaction of the transcription factors NF-Y and USF1 with the CP27 proximal promoter.

Indexed as

AnimalsBase SequenceCCAAT-Binding FactorE-Box ElementsEmbryonic Stem CellsExtracellular Matrix ProteinsGene Expression RegulationMiceNuclear ProteinsPromoter Regions, GeneticProteinsUpstream Stimulatory FactorsCCAAT-Binding FactorCfdp1 protein, mouseExtracellular Matrix ProteinsNuclear ProteinsProteinsUpstream Stimulatory FactorsUsf1 protein, mouse

Identifiers

PMID21078375
PMCPMC3039062
OpenAlexW2009326040

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.