Evidence map›Paper›PMID 21076810›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2011

Characterization of opaque2 modifier QTLs and candidate genes in recombinant inbred lines derived from the K0326Y quality protein maize inbred.

David R Holding, Brenda G Hunter, John P Klingler, Song Wu, Xiaomei Guo, Bryan C Gibbon, Rongling Wu, Jan-Michele Schulze, Rudolf Jung, Brian A Larkins

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification of QTLs associated withFrontiers in plant science · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Final Selection of Quality Protein Popcorn Hybrids.Frontiers in plant science · 2021
    Article
  10. Genetic enhancement of essential amino acids for nutritional enrichment of maize protein quality through marker assisted selection.Physiology and molecular biology of plants : an international journal of functional plant biology · 2020
    Article
  11. Article
  12. Plants (Basel, Switzerland) · 2020
    Article
  13. Article
  14. Article
  15. High frequency DNA rearrangement atCommunications biology · 2019
    Article
  16. Review
  17. Generation and Evaluation of ModifiedFrontiers in plant science · 2018
    Article
  18. Article
  19. Article
  20. Gene duplication confers enhanced expression of 27-kDa γ-zein for endosperm modification in quality protein maize.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 2 countries.

David R HoldingDepartment of Agronomy and Horticulture, University of Nebraska, Lincoln, NE 68588-0665, USA. dholding2@unl.edu
Brenda G Hunter
John P Klingler
Song Wu
Xiaomei Guo
Bryan C Gibbon
Rongling Wu
Jan-Michele Schulze
Rudolf Jung
Brian A Larkins
Pioneer Hi-Bred · USUniversity of Arizona · USUniversity of Nebraska–Lincoln · USBaylor University · USKing Abdullah University of Science and Technology · SAPennsylvania State University · USSt. Jude Children's Research Hospital · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quality protein maize (QPM) is a high lysine-containing corn that is based on genetic modification of the opaque2 (o2) mutant. In QPM, modifier genes convert the starchy endosperm of o2 to the vitreous phenotype of wild type maize. There are multiple, unlinked o2 modifier loci (Opm) in QPM and their nature and mode of action are unknown. We previously identified seven Opm QTLs and characterized 16 genes that are differentially up-regulated at a significant level in K0326Y QPM, compared to the starchy endosperm mutant W64Ao2. In order to further characterize these Opm QTLs and the genes up-regulated in K0326Y QPM, we created a population of 314 recombinant inbred lines (RILs) from a cross between K0326Y QPM and W64Ao2. The RILs were characterized for three traits associated with endosperm texture: vitreousness, density and hardness. Genetic linkage analysis of the RIL population confirmed three of the previously identified QTLs associated with o2 endosperm modification in K0326Y QPM. Many of the genes up-regulated in K0326Y QPM showed substantially higher levels of expression in vitreous compared with opaque RILs. These included genes associated with the upstream regulation of the ethylene response pathway, and a gene encoding a regulatory subunit of pyrophosphate-dependent fructose-6-phosphate 1-phosphotransferase, an adaptive enzyme of the glycolytic pathway.

Indexed as

Genetic Association StudiesInbreedingChromosome MappingChromosomes, PlantDNA-Binding ProteinsGene Expression Regulation, PlantGenes, PlantHardnessMolecular WeightNuclear ProteinsPhenotypePlant ProteinsQuantitative Trait, HeritableQuantitative Trait LociRecombination, GeneticTranscription FactorsDNA-Binding ProteinsNuclear ProteinsOHP1 protein, Zea maysPlant ProteinsTranscription FactorsZein

Identifiers

PMID21076810
OpenAlexW2010161292

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.