Evidence map›Paper›PMID 21076402›Full record

ArticleNature structural & molecular biology2010

Distinct conformational states of HIV-1 gp41 are recognized by neutralizing and non-neutralizing antibodies.

Gary Frey, Jia Chen, Sophia Rits-Volloch, Michael M Freeman, Susan Zolla-Pazner, Bing Chen

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed.

  1. Trial
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  5. Recent advancements in single dose slow-release devices for prophylactic vaccines.Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology · 2023
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  18. Quantifying Antibody Responses Induced by Antigen-Agnostic Immunotherapies.Molecular therapy. Methods & clinical development · 2019
    Article
  19. Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Gary FreyDivision of Molecular Medicine, Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Jia Chen
Sophia Rits-Volloch
Michael M Freeman
Susan Zolla-Pazner
Bing Chen

Funding

IMMUNOLOGIC RELATEDNESS AMONG AND BETWEEN HIV-1 SUBTYPESR01AI036085 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ZOLLA-PAZNER, SUSAN B · 1994 to 2008
$5.3M
Impact of HIV Envelope Conformation on ImmunogenicityR01AI084794 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI BAROUCH, DAN H., CHEN, BING · 2009 to 2013
$4.0M
Biochemical and structural studies of distinct conformational states of gp41R01GM083680 · NIGMS · BOSTON CHILDREN'S HOSPITAL · PI CHEN, BING · 2009 to 2013
$1.8M
NIAID NIH HHS AI084794NIAID NIH HHS AI36085NIAID NIH HHS R01 AI036085NIAID NIH HHS R01 AI084794NIGMS NIH HHS GM083680NIGMS NIH HHS R01 GM083680
6 · The paper itself

Abstract

HIV-1 envelope glycoprotein gp41 undergoes large conformational changes to drive fusion of viral and target cell membranes, adopting at least three distinct conformations during the viral entry process. Neutralizing antibodies against gp41 block HIV-1 infection by targeting gp41's membrane-proximal external region in a fusion-intermediate state. Here we report biochemical and structural evidence that non-neutralizing antibodies, capable of binding with high affinity to an immunodominant segment adjacent to the neutralizing epitopes in the membrane-proximal region, recognize a gp41 conformation that exists only when membrane fusion is complete. We propose that these non-neutralizing antibodies are induced in HIV-1-infected individuals by gp41 in a triggered, postfusion form and contribute to production of ineffective humoral responses. These results have important implications for gp41-based vaccine design.

Indexed as

Antibodies, MonoclonalAntibodies, NeutralizingAntibodies, ViralCrystallography, X-RayHIV-1HIV Envelope Protein gp41HumansImmunity, HumoralImmunoglobulin Fab FragmentsModels, MolecularProtein Structure, TertiaryVirus InternalizationAntibodies, MonoclonalAntibodies, NeutralizingAntibodies, Viralgp41 protein, Human immunodeficiency virus 1HIV Envelope Protein gp41Immunoglobulin Fab Fragments

Identifiers

PMID21076402
PMCPMC2997185

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.