Evidence map›Paper›PMID 21076400›Full record

ArticleNature structural & molecular biology2010

Crystal structure of a non-neutralizing antibody to the HIV-1 gp41 membrane-proximal external region.

Nathan I Nicely, S Moses Dennison, Leonard Spicer, Richard M Scearce, Garnett Kelsoe, Yoshihiro Ueda, Haiyan Chen, Hua-Xin Liao, S Munir Alam, Barton F Haynes

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

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  9. Application of antihelix antibodies in protein structure determination.Proceedings of the National Academy of Sciences of the United States of America · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Nathan I NicelyDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina, USA. nathan.nicely@duke.edu
S Moses Dennison
Leonard Spicer
Richard M Scearce
Garnett Kelsoe
Yoshihiro Ueda
Haiyan Chen
Hua-Xin Liao
S Munir Alam
Barton F Haynes

Funding

Viral Sequencing CoreU19AI067854 · NIAID · DUKE UNIVERSITY · PI GRAY, CLIVE MAURICE · 2006 to 2011
$290.5M
NIAID NIH HHS U19 AI067854
6 · The paper itself

Abstract

The monoclonal antibody 13H11 shares part of its epitope in the HIV-1 gp41 membrane-proximal external region (MPER) with the rare, broadly neutralizing human antibody 2F5. Although 13H11 partially cross-blocked 2F5 binding, 13H11 is non-neutralizing and does not block 2F5 neutralization. We show that unlike 2F5, 13H11 binds to a well-defined helical MPER structure that is consistent with the structure of gp41 in a post-fusion six-helix bundle conformation.

Indexed as

Amino Acid SequenceAntibodies, MonoclonalCrystallography, X-RayHIV-1HIV AntibodiesHIV Envelope Protein gp41HumansImmunoglobulin Fab FragmentsModels, MolecularMolecular Sequence DataAntibodies, Monoclonalgp41 protein, Human immunodeficiency virus 1HIV AntibodiesHIV Envelope Protein gp41Immunoglobulin Fab Fragments

Identifiers

PMID21076400
PMCPMC6081738

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.