ArticleNucleic acids research2011
The RIKEN integrated database of mammals.
Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
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Who cites it
11 citing papers in PubMed.
- The use of foundational ontologies in biomedical research.Journal of biomedical semantics · 2023Review
- Asian Mouse Mutagenesis Resource Association (AMMRA): mouse genetics and laboratory animal resources in the Asia Pacific.Mammalian genome : official journal of the International Mammalian Genome Society · 2022Review
- Establishment and application of information resource of mutant mice in RIKEN BioResource Research Center.Laboratory animal research · 2021Review
- CLO: The cell line ontology.Journal of biomedical semantics · 2014Article
- PosMed: Ranking genes and bioresources based on Semantic Web Association Study.Nucleic acids research · 2013Article
- Computational tools for comparative phenomics: the role and promise of ontologies.Mammalian genome : official journal of the International Mammalian Genome Society · 2012Review
- Ontology-based cross-species integration and analysis of Saccharomyces cerevisiae phenotypes.Journal of biomedical semantics · 2012Article
- The Units Ontology: a tool for integrating units of measurement in science.Database : the journal of biological databases and curation · 2012Article
- Semantic-JSON: a lightweight web service interface for Semantic Web contents integrating multiple life science databases.Nucleic acids research · 2011Article
- Update of the FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation.Nucleic acids research · 2011Article
- The 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection.Nucleic acids research · 2011Article
Corrections and comments
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Authors and funding
28 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The RIKEN integrated database of mammals (http://scinets.org/db/mammal) is the official undertaking to integrate its mammalian databases produced from multiple large-scale programs that have been promoted by the institute. The database integrates not only RIKEN's original databases, such as FANTOM, the ENU mutagenesis program, the RIKEN Cerebellar Development Transcriptome Database and the Bioresource Database, but also imported data from public databases, such as Ensembl, MGI and biomedical ontologies. Our integrated database has been implemented on the infrastructure of publication medium for databases, termed SciNetS/SciNeS, or the Scientists' Networking System, where the data and metadata are structured as a semantic web and are downloadable in various standardized formats. The top-level ontology-based implementation of mammal-related data directly integrates the representative knowledge and individual data records in existing databases to ensure advanced cross-database searches and reduced unevenness of the data management operations. Through the development of this database, we propose a novel methodology for the development of standardized comprehensive management of heterogeneous data sets in multiple databases to improve the sustainability, accessibility, utility and publicity of the data of biomedical information.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.