ArticlePlant physiology2011
MASCP Gator: an aggregation portal for the visualization of Arabidopsis proteomics data.
Article in Plant physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.
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Who cites it
44 citing papers in PubMed.
- The Main Functions of Plastids.Methods in molecular biology (Clifton, N.J.) · 2024Review
- The Arabidopsis PeptideAtlas: Harnessing worldwide proteomics data to create a comprehensive community proteomics resource.The Plant cell · 2021Article
- Subcellular Proteomics as a Unified Approach of Experimental Localizations and Computed Prediction Data for Arabidopsis and Crop Plants.Advances in experimental medicine and biology · 2021Article
- Plant Proteomics and Systems Biology.Advances in experimental medicine and biology · 2021Article
- The Arabidopsis EPlant molecular biology · 2019Article
- Unraveling Hidden Components of the Chloroplast Envelope Proteome: Opportunities and Limits of Better MS Sensitivity.Molecular & cellular proteomics : MCP · 2019Article
- Proteomics: a powerful tool to study plant responses to biotic stress.Plant methods · 2019Review
- Dual or Not Dual?-Comparative Analysis of Fluorescence Microscopy-Based Approaches to Study Organelle Targeting Specificity of Nuclear-Encoded Plant Proteins.Frontiers in plant science · 2018Article
- ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology.The Plant cell · 2017Article
- ChloroKB: A Web Application for the Integration of Knowledge Related to Chloroplast Metabolic Network.Plant physiology · 2017Article
- EnCOUNTer: a parsing tool to uncover the mature N-terminus of organelle-targeted proteins in complex samples.BMC bioinformatics · 2017Article
- SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations.Nucleic acids research · 2017Article
- A Proteomic View on the Role of Legume Symbiotic Interactions.Frontiers in plant science · 2017Review
- L-Galactono-1,4-lactone dehydrogenase is an assembly factor of the membrane arm of mitochondrial complex I in Arabidopsis.Plant molecular biology · 2016Article
- Quantitation of Vacuolar Sugar Transporter Abundance Changes Using QconCAT Synthtetic Peptides.Frontiers in plant science · 2016Article
- The EF-Hand Ca2+ Binding Protein MICU Choreographs Mitochondrial Ca2+ Dynamics in Arabidopsis.The Plant cell · 2015Article
- PLASTID MOVEMENT IMPAIRED1 and PLASTID MOVEMENT IMPAIRED1-RELATED1 Mediate Photorelocation Movements of Both Chloroplasts and Nuclei.Plant physiology · 2015Article
- Dual use of peptide mass spectra: Protein atlas and genome annotation.Current plant biology · 2015Article
- The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress.The Plant cell · 2014Article
- Meta-Analysis of Arabidopsis thaliana Phospho-Proteomics Data Reveals Compartmentalization of Phosphorylation Motifs.The Plant cell · 2014Article
Corrections and comments
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Authors and funding
22 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Proteomics has become a critical tool in the functional understanding of plant processes at the molecular level. Proteomics-based studies have also contributed to the ever-expanding array of data in modern biology, with many generating Web portals and online resources that contain incrementally expanding and updated information. Many of these resources reflect specialist research areas with significant and novel information that is not currently captured by centralized repositories. The Arabidopsis (Arabidopsis thaliana) community is well served by a number of online proteomics resources that hold an abundance of functional information. These sites can be difficult to locate among a multitude of online resources. Furthermore, they can be difficult to navigate in order to identify specific features of interest without significant technical knowledge. Recently, members of the Arabidopsis proteomics community involved in developing many of these resources decided to develop a summary aggregation portal that is capable of retrieving proteomics data from a series of online resources on the fly. The Web portal is known as the MASCP Gator and can be accessed at the following address: http://gator.masc-proteomics.org/. Significantly, proteomics data displayed at this site retrieve information from the data repositories upon each request. This means that information is always up to date and displays the latest data sets. The site also provides hyperlinks back to the source information hosted at each of the curated databases to facilitate more in-depth analysis of the primary data.
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Registered trials
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