Evidence map›Paper›PMID 21073853›Full record

ArticleAnalytical biochemistry2011

Application of a high-throughput fluorescent acetyltransferase assay to identify inhibitors of homocitrate synthase.

Stacie L Bulfer, Thomas J McQuade, Martha J Larsen, Raymond C Trievel

Open access · greenAbstract read
In one paragraph

Article in Analytical biochemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Chemoproteomics Yields a Selective Molecular Host for Acetyl-CoA.Journal of the American Chemical Society · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Stacie L BulferDepartment of Biological Chemistry, University of Michigan, Ann Arbor, MI 48109, USA.
Thomas J McQuade
Martha J Larsen
Raymond C Trievel
University of Michigan–Ann Arbor · US

Funding

Cellular Biotechnology Training Program (CBTP)T32GM008353 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SCHWENDEMAN, ANNA · 1991 to 2021
$9.3M
Cellular Biotechnology Training Program (CBTP) - Years 31-35T32GM145304 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Guizhi Zhu · 2022 to 2026
$2.6M
Structure and Function of SET Domain MethyltransferasesR01GM073839 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TRIEVEL, RAYMOND C · 2006 to 2010
$1.4M
NIGMS NIH HHS 5T32GM008353-18NIGMS NIH HHS R01 GM073839NIGMS NIH HHS T32 GM008353NIGMS NIH HHS T32 GM145304
6 · The paper itself

Abstract

Homocitrate synthase (HCS) catalyzes the first step of l-lysine biosynthesis in fungi by condensing acetyl-coenzyme A and 2-oxoglutarate to form 3R-homocitrate and coenzyme A. Due to its conservation in pathogenic fungi, HCS has been proposed as a candidate for antifungal drug design. Here we report the development and validation of a robust fluorescent assay for HCS that is amenable to high-throughput screening for inhibitors in vitro. Using this assay, Schizosaccharomyces pombe HCS was screened against a diverse library of approximately 41,000 small molecules. Following confirmation, counter screens, and dose-response analysis, we prioritized more than 100 compounds for further in vitro and in vivo analysis. This assay can be readily adapted to screen for small molecule modulators of other acyl-CoA-dependent acyltransferases or enzymes that generate a product with a free sulfhydryl group, including histone acetyltransferases, aminoglycoside N-acetyltransferases, thioesterases, and enzymes involved in lipid metabolism.

Indexed as

Acyl Coenzyme AChelating AgentsDrug Evaluation, PreclinicalEnzyme AssaysEnzyme InhibitorsHigh-Throughput Screening AssaysHistone AcetyltransferasesMetalsNaphthalenesOxo-Acid-LyasesPyrrolesReproducibility of ResultsSchizosaccharomycesSmall Molecule LibrariesSpectrometry, FluorescenceSulfhydryl CompoundsAcyl Coenzyme AChelating AgentsEnzyme InhibitorsHistone Acetyltransferaseshomocitrate synthaseMetalsNaphthalenesOxo-Acid-LyasesPyrrolesSmall Molecule LibrariesSulfhydryl CompoundsThioGlo-1

Identifiers

PMID21073853
PMCPMC3115995
OpenAlexW1986122227

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.