Evidence map›Paper›PMID 21070952›Full record

ArticleStructure (London, England : 1993)2010

Crystallographic and functional analysis of the ESCRT-I /HIV-1 Gag PTAP interaction.

Young Jun Im, Lillian Kuo, Xuefeng Ren, Patricia V Burgos, Xue Zhi Zhao, Fa Liu, Terrence R Burke, Juan S Bonifacino, Eric O Freed, James H Hurley

Open access · greenAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
  2. bioRxiv : the preprint server for biology · 2026
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  8. Leveraging the therapeutic, biological, and self-assembling potential of peptides for the treatment of viral infections.Journal of controlled release : official journal of the Controlled Release Society · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Young Jun ImLaboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892-0580, USA.
Lillian Kuo
Xuefeng Ren
Patricia V Burgos
Xue Zhi Zhao
Fa Liu
Terrence R Burke
Juan S Bonifacino
Eric O Freed
James H Hurley
Eunice Kennedy Shriver National Institute of Child Health and Human Development · USFrederick National Laboratory for Cancer Research · USNational Institutes of Health · USNational Institute of Diabetes and Digestive and Kidney Diseases · US

Funding

Protein Trafficking In The Endosomal-Lysosomal SystemZIAHD001607 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI BONIFACINO, JUAN · 2009 to 2025
$48.3M
Design and Synthesis of HIV Integrase as Potential Anti-AIDS DrugsZIABC007363 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BURKE, TERRENCE · 2009 to 2025
$11.7M
Retrovirus Budding and Endosomal SortingZIABC010776 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI FREED, ERIC · 2009 to 2015
$3.5M
Structural Studies of Alix and ESCRT Complexes in HIV-1 BuddingZIADK036125 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI HURLEY, JAMES · 2009 to 2013
$2.6M
Intramural NIH HHS ZIA DK036125NCI NIH HHS Y1-CO-1020NIGMS NIH HHS Y1-GM-1104
6 · The paper itself

Abstract

Budding of HIV-1 requires the binding of the PTAP late domain of the Gag p6 protein to the UEV domain of the TSG101 subunit of ESCRT-I. The normal function of this motif in cells is in receptor downregulation. Here, we report the 1.4-1.6 Å structures of the human TSG101 UEV domain alone and with wild-type and mutant HIV-1 PTAP and Hrs PSAP nonapeptides. The hydroxyl of the Thr or Ser residue in the P(S/T)AP motif hydrogen bonds with the main chain of Asn69. Mutation of the Asn to Pro, blocking the main-chain amide, abrogates PTAP motif binding in vitro and blocks budding of HIV-1 from cells. N69P and other PTAP binding-deficient alleles of TSG101 did not rescue HIV-1 budding. However, the mutant alleles did rescue downregulation of endogenous EGF receptor. This demonstrates that the PSAP motif is not rate determining in EGF receptor downregulation under normal conditions.

Indexed as

Models, MolecularMolecular Dynamics SimulationProtein ConformationCrystallographyDNA-Binding ProteinsEndosomal Sorting Complexes Required for TransportErbB Receptorsgag Gene Products, Human Immunodeficiency VirusHeLa CellsHIV-1HumansHydrogen BondingProtein Structure, TertiaryRNA InterferenceTranscription FactorsTsg101 ProteinDNA-Binding ProteinsEndosomal Sorting Complexes Required for TransportErbB Receptorsgag Gene Products, Human Immunodeficiency VirusTranscription FactorsTsg101 Protein

Identifiers

PMID21070952
PMCPMC3124085
OpenAlexW2110590700

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.