Evidence map›Paper›PMID 21068245›Full record

ArticleJournal of virology2011

Human parainfluenza virus type 2 L protein regions required for interaction with other viral proteins and mRNA capping.

Machiko Nishio, Masato Tsurudome, Dominique Garcin, Hiroshi Komada, Morihiro Ito, Philippe Le Mercier, Tetsuya Nosaka, Daniel Kolakofsky

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In one paragraph

Article in Journal of virology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 29 citations in OpenAlex.

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  9. Structure of a paramyxovirus polymerase complex reveals a unique methyltransferase-CTD conformation.Proceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Machiko NishioDepartment of Microbiology, Mie University Graduate School of Medicine, 2-174, Edobashi, Tsu, Mie 514-8507, Japan. nishio@doc.medic.mie-u.ac.jp
Masato Tsurudome
Dominique Garcin
Hiroshi Komada
Morihiro Ito
Philippe Le Mercier
Tetsuya Nosaka
Daniel Kolakofsky
Mie University · JPUniversity of Geneva · CHChubu University · JPSIB Swiss Institute of Bioinformatics · CHSuzuka University of Medical Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The large RNA polymerase (L) protein of human parainfluenza virus type 2 (hPIV2) binds the nucleocapsid, phosphoprotein, and V protein, as well as itself, and these interactions are essential for transcription and replication of the viral RNA genome. Although all of these interactions were found to be mediated through the domains within the N terminus of L, the C terminus of the L protein was also required for minigenome reporter gene expression. We have identified a highly conserved rubulavirus domain near the C terminus of the L protein that is required for mRNA synthesis but not for genome replication. Remarkably, this region of L shares homology with a conserved region of cellular capping enzymes that binds GTP and forms a lysyl-GMP enzyme intermediate, the first step in the cellular capping reaction. We propose that this conserved region of L also binds GTP (or GDP) to carry out the second step of the unconventional nonsegmented negative-strand virus capping reaction.

Indexed as

RNA Processing, Post-TranscriptionalTranscription, GeneticVirus ReplicationCell LineHumansParainfluenza Virus 2, HumanProtein BindingRNA CapsRNA, MessengerRNA, ViralSequence Homology, Amino AcidViral ProteinsL protein, Human parainfluenza virus 2RNA CapsRNA, MessengerRNA, ViralViral Proteins

Identifiers

PMID21068245
PMCPMC3020016
OpenAlexW2129305243

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.