Evidence map›Paper›PMID 21067840›Full record

ArticleJournal of hepatology2011

Inactivation of Ras GTPase-activating proteins promotes unrestrained activity of wild-type Ras in human liver cancer.

Diego F Calvisi, Sara Ladu, Elizabeth A Conner, Daekwan Seo, Jer-Tsong Hsieh, Valentina M Factor, Snorri S Thorgeirsson

Open access · greenAbstract read
In one paragraph

Article in Journal of hepatology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 163 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. PITX1 plays essential functions in cancer.Frontiers in oncology · 2023
    Review
  17. Review
  18. Article
  19. Article
  20. Review

28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Diego F CalvisiLaboratory of Experimental Carcinogenesis, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892-4262, USA.
Sara Ladu
Elizabeth A Conner
Daekwan Seo
Jer-Tsong Hsieh
Valentina M Factor
Snorri S Thorgeirsson
Center for Cancer Research · USNational Cancer Institute · USNational Institutes of Health · USThe University of Texas Southwestern Medical Center · US

Funding

Genomic Classification of Human Liver CancerZIABC011173 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI THORGEIRSSON, SNORRI · 2009 to 2014
$4.8M
Intramural NIH HHS Z99 CA999999
6 · The paper itself

Abstract

BACKGROUND &

aimsAberrant activation of the RAS pathway is ubiquitous in human hepatocarcinogenesis, but the molecular mechanisms leading to RAS induction in the absence of RAS mutations remain under-investigated. We defined the role of Ras GTPase activating proteins (GAPs) in the constitutive activity of Ras signaling during human hepatocarcinogenesis.

methodsThe mutation status of RAS genes and RAS effectors was assessed in a collection of human hepatocellular carcinomas (HCC). Levels of RAS GAPs (RASA1-4, RASAL1, nGAP, SYNGAP1, DAB2IP, and NF1) and the RASAL1 upstream inducer PITX1 were determined by real-time RT-PCR and immunoblotting. The promoter and genomic status of RASAL1, DAB2IP, NF1, and PITX1 were assessed by methylation assays and microsatellite analysis. Effects of RASAL1, DAB2IP, and PITX1 on HCC growth were evaluated by transfection and siRNA analyses of HCC cell lines.

resultsIn the absence of Ras mutations, downregulation of at least one RAS GAP (RASAL1, DAB2IP, or NF1) was found in all HCC samples. Low levels of DAB2IP and PITX1 were detected mostly in a HCC subclass from patients with poor survival, indicating that these proteins control tumor aggressiveness. In HCC cells, reactivation of RASAL1, DAB2IP, and PITX1 inhibited proliferation and induced apoptosis, whereas their silencing increased proliferation and resistance to apoptosis.

conclusionsSelective suppression of RASAL1, DAB2IP, or NF1 RAS GAPs results in unrestrained activation of Ras signaling in the presence of wild-type RAS in HCC.

Indexed as

ApoptosisCarcinoma, HepatocellularCell ProliferationDNA MethylationHumansLiver NeoplasmsLoss of HeterozygosityMAP Kinase Kinase Kinase 5Paired Box Transcription FactorsPhospholipase C gammaras GTPase-Activating Proteinsras ProteinsVascular Endothelial Growth Factor Receptor-2DAB2IP protein, humanhomeobox protein PITX1MAP3K5 protein, humanMAP Kinase Kinase Kinase 5Paired Box Transcription FactorsPhospholipase C gammaras GTPase-Activating Proteinsras ProteinsVascular Endothelial Growth Factor Receptor-2

Identifiers

PMID21067840
PMCPMC3031080
OpenAlexW2060901213

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.