ArticleNucleic acids research2011
DDBJ progress report.
Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
23 citing papers in PubMed.
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- AptaDiff: de novo design and optimization of aptamers based on diffusion models.Briefings in bioinformatics · 2024Article
- Article
- Systems biology in the context of big data and networks.BioMed research international · 2014Review
- Genomics and bioinformatics resources for translational science in Rosaceae.Plant biotechnology reports · 2014Review
- DDBJ read annotation pipeline: a cloud computing-based pipeline for high-throughput analysis of next-generation sequencing data.DNA research : an international journal for rapid publication of reports on genes and genomes · 2013Article
- The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies.Journal of biomedical semantics · 2013Article
- Genenames.org: the HGNC resources in 2013.Nucleic acids research · 2013Article
- DDBJ new system and service refactoring.Nucleic acids research · 2013Article
- GenBank.Nucleic acids research · 2013Article
- The annotation-enriched non-redundant patent sequence databases.Database : the journal of biological databases and curation · 2013Article
- Online tools for bioinformatics analyses in nutrition sciences.Advances in nutrition (Bethesda, Md.) · 2012Review
- GIDL: a rule based expert system for GenBank Intelligent Data Loading into the Molecular Biodiversity Database.BMC bioinformatics · 2012Article
- The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata.Nucleic acids research · 2012Article
- Major submissions tool developments at the European Nucleotide Archive.Nucleic acids research · 2012Article
- The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experiments.Nucleic acids research · 2012Article
- GenBank.Nucleic acids research · 2012Article
- Article
- Fungal genome resources at NCBI.Mycology · 2011Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
11 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The DNA Data Bank of Japan (DDBJ, http://www.ddbj.nig.ac.jp) provides a nucleotide sequence archive database and accompanying database tools for sequence submission, entry retrieval and annotation analysis. The DDBJ collected and released 3,637,446 entries/2,272,231,889 bases between July 2009 and June 2010. A highlight of the released data was archive datasets from next-generation sequencing reads of Japanese rice cultivar, Koshihikari submitted by the National Institute of Agrobiological Sciences. In this period, we started a new archive for quantitative genomics data, the DDBJ Omics aRchive (DOR). The DOR stores quantitative data both from the microarray and high-throughput new sequencing platforms. Moreover, we improved the content of the DDBJ patent sequence, released a new submission tool of the DDBJ Sequence Read Archive (DRA) which archives massive raw sequencing reads, and enhanced a cloud computing-based analytical system from sequencing reads, the DDBJ Read Annotation Pipeline. In this article, we describe these new functions of the DDBJ databases and support tools.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.