ArticleNucleic acids research2011
The mouse Gene Expression Database (GXD): 2011 update.
Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
51 citing papers in PubMed.
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- Single-cell transcriptomics of human iPSC differentiation dynamics reveal a core molecular network of Parkinson's disease.Communications biology · 2022Article
- Induction of Cyp450 enzymes by 4-thiazolidinone-based derivatives in 3T3-L1 cells in vitro.Naunyn-Schmiedeberg's archives of pharmacology · 2021Article
- Cumulative contact frequency of a chromatin region is an intrinsic property linked to its function.PeerJ · 2020Article
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- Role of CYP2B in Phenobarbital-Induced Hepatocyte Proliferation in Mice.Drug metabolism and disposition: the biological fate of chemicals · 2017Article
- Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design.BMC developmental biology · 2016Article
- Gbx2 is essential for maintaining thalamic neuron identity and repressing habenular characters in the developing thalamus.Developmental biology · 2015Article
- Dysregulation of Mitochondrial Functions and Osteogenic Differentiation in Cisd2-Deficient Murine Induced Pluripotent Stem Cells.Stem cells and development · 2015Article
- GXD: a community resource of mouse Gene Expression Data.Mammalian genome : official journal of the International Mammalian Genome Society · 2015Article
- The mouse gene expression database: New features and how to use them effectively.Genesis (New York, N.Y. : 2000) · 2015Article
- MIsoMine: a genome-scale high-resolution data portal of expression, function and networks at the splice isoform level in the mouse.Database : the journal of biological databases and curation · 2015Article
- Cell fusion enhances mesendodermal differentiation of human induced pluripotent stem cells.Stem cells and development · 2014Article
- CpG island-mediated global gene regulatory modes in mouse embryonic stem cells.Nature communications · 2014Article
- Identification of a face enhancer reveals direct regulation of LIM homeobox 8 (Lhx8) by wingless-int (WNT)/β-catenin signaling.The Journal of biological chemistry · 2014Article
- The gene expression database for mouse development (GXD): putting developmental expression information at your fingertips.Developmental dynamics : an official publication of the American Association of Anatomists · 2014Review
- The mouse Gene Expression Database (GXD): 2014 update.Nucleic acids research · 2014Article
- Mouse IDGenes: a reference database for genetic interactions in the developing mouse brain.Database : the journal of biological databases and curation · 2014Article
- Differences in gene expression between mouse and human for dynamically regulated genes in early embryo.PloS one · 2014Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors.
Funding
Abstract
The Gene Expression Database (GXD) is a community resource of mouse developmental expression information. GXD integrates different types of expression data at the transcript and protein level and captures expression information from many different mouse strains and mutants. GXD places these data in the larger biological context through integration with other Mouse Genome Informatics (MGI) resources and interconnections with many other databases. Web-based query forms support simple or complex searches that take advantage of all these integrated data. The data in GXD are obtained from the literature, from individual laboratories, and from large-scale data providers. All data are annotated and reviewed by GXD curators. Since the last report, the GXD data content has increased significantly, the interface and data displays have been improved, new querying capabilities were implemented, and links to other expression resources were added. GXD is available through the MGI web site (www.informatics.jax.org), or directly at www.informatics.jax.org/expression.shtml.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.