ArticleNucleic acids research2011
Rfam: Wikipedia, clans and the "decimal" release.
Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 242 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
242 citing papers in PubMed.
- Viral non-coding RNA structure annotation and API-based data retrieval with Rfam and R2DT.bioRxiv : the preprint server for biology · 2026Article
- Article
- Chromosome-level genome assembly of the western flower thrips Frankliniella occidentalis.Scientific data · 2024Article
- A high heterozygosity genome assembly of Aedes albopictus enables the discovery of the association of PGANT3 with blood-feeding behavior.BMC genomics · 2024Article
- A chromosome-level genome for the flower thrips Frankliniella intonsa.Scientific data · 2024Article
- Recent trends in RNA informatics: a review of machine learning and deep learning for RNA secondary structure prediction and RNA drug discovery.Briefings in bioinformatics · 2023Review
- RNA Secondary Structure Prediction Based on Energy Models.Methods in molecular biology (Clifton, N.J.) · 2023Article
- The chromosome-scale reference genome and transcriptome analysis ofFrontiers in plant science · 2023Article
- Article
- Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia.Bioinformatics (Oxford, England) · 2022Article
- BRIO: a web server for RNA sequence and structure motif scan.Nucleic acids research · 2021Article
- Secretory microRNA Profiles of Third- and Fourth-StagePathogens (Basel, Switzerland) · 2021Article
- A method for achieving complete microbial genomes and improving bins from metagenomics data.PLoS computational biology · 2021Article
- RNA secondary structure prediction using deep learning with thermodynamic integration.Nature communications · 2021Article
- The Dfam community resource of transposable element families, sequence models, and genome annotations.Mobile DNA · 2021Article
- RNAcentral 2021: secondary structure integration, improved sequence search and new member databases.Nucleic acids research · 2021Article
- High quality genome of Erigeron breviscapus provides a reference for herbal plants in Asteraceae.Molecular ecology resources · 2021Article
- A High-Quality Genome Assembly of the North American Song Sparrow,G3 (Bethesda, Md.) · 2020Article
- A draft genome sequence of the elusive giant squid, Architeuthis dux.GigaScience · 2020Article
- Draft Genome of the European Mouflon (Frontiers in genetics · 2020Article
182 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
11 authors.
Funding
Abstract
The Rfam database aims to catalogue non-coding RNAs through the use of sequence alignments and statistical profile models known as covariance models. In this contribution, we discuss the pros and cons of using the online encyclopedia, Wikipedia, as a source of community-derived annotation. We discuss the addition of groupings of related RNA families into clans and new developments to the website. Rfam is available on the Web at http://rfam.sanger.ac.uk.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.