Evidence map›Paper›PMID 21057022›Full record

ArticleApplied and environmental microbiology2011

Microbiome of fungus-growing termites: a new reservoir for lignocellulase genes.

Ning Liu, Xing Yan, Meiling Zhang, Lei Xie, Qian Wang, Yongping Huang, Xuguo Zhou, Shengyue Wang, Zhihua Zhou

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 80 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Ning LiuKey Laboratory of Insect Developmental and Evolutionary Biology, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, People's Republic of China.
Xing Yan
Meiling Zhang
Lei Xie
Qian Wang
Yongping Huang
Xuguo Zhou
Shengyue Wang
Zhihua Zhou
Chinese Academy of Sciences · CNShanghai Institutes for Biological Sciences · CNCenter for Excellence in Molecular Plant Sciences · CNChinese National Human Genome Center · CNEast China Normal University · CNUniversity of Kentucky · US

Funding

Cultural Influences on Heavy Episodic Drinking among Latino College StudentsF31AA021302 · NIAAA · PENNSYLVANIA STATE UNIVERSITY, THE · PI VARVIL-WELD, LINDSEY · 2012 to 2013
$71k
NIAAA NIH HHS F31 AA021302
6 · The paper itself

Abstract

Fungus-growing termites play an important role in lignocellulose degradation and carbon mineralization in tropical and subtropical regions, but the degradation potentiality of their gut microbiota has long been neglected. The high quality and quantity of intestinal microbial DNA are indispensable for exploring new cellulose genes from termites by function-based screening. Here, using a refined intestinal microbial DNA extraction method followed by multiple-displacement amplification (MDA), a fosmid library was constructed from the total microbial DNA isolated from the gut of a termite growing in fungi. Functional screening for endoglucanase, cellobiohydrolase, β-glucosidase, and xylanase resulted in 12 β-glucosidase-positive clones and one xylanase-positive clone. The sequencing result of the xylanase-positive clone revealed an 1,818-bp open reading frame (ORF) encoding a 64.5-kDa multidomain endo-1,4-β-xylanase, designated Xyl6E7, which consisted of an N-terminal GH11 family catalytic domain, a CBM_4_9 domain, and a Listeria-Bacteroides repeat domain. Xyl6E7 was a highly active, substrate-specific, and endo-acting alkaline xylanase with considerably wide pH tolerance and stability but extremely low thermostability.

Indexed as

MetagenomeAnimalsCellulasesGene LibraryIsopteraLigninMolecular Sequence DataSequence Analysis, DNASequence HomologyCellulasesLigninlignocellulose

Identifiers

PMID21057022
PMCPMC3019695
OpenAlexW2140500771

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.