Evidence map›Paper›PMID 21056546›Full record

ArticleBiochemical and biophysical research communications2010

Transcriptional regulation of the hypocretin/orexin gene by NR6A1.

Susumu Tanaka, Tohru Kodama, Takashi Nonaka, Hiromi Toyoda, Makoto Arai, Miyuki Fukazawa, Yoshiko Honda, Makoto Honda, Emmanuel Mignot

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. The transcription factor HAND2 up-regulates transcription of theThe Journal of biological chemistry · 2020
    Article
  4. Involvement of PLAGL1/ZAC1 in hypocretin/orexin transcription.International journal of molecular medicine · 2019
    Article
  5. DEC2 modulates orexin expression and regulates sleep.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Circadian rhythms and sleep--the metabolic connection.Pflugers Archiv : European journal of physiology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Susumu TanakaDepartment of Sleep Disorders Research, Tokyo Institute of Psychiatry, Tokyo, Japan. tanaka-ss@igakuken.or.jp
Tohru Kodama
Takashi Nonaka
Hiromi Toyoda
Makoto Arai
Miyuki Fukazawa
Yoshiko Honda
Makoto Honda
Emmanuel Mignot
Tokyo Institute of Psychiatry · JPTokyo Metropolitan Institute of Medical Science · JPStanford University · US

Funding

SPECTRUM OF NARCOLEPSY AND ITS SYMPTOMSP50NS023724 · NINDS · STANFORD UNIVERSITY · PI MIGNOT, EMMANUEL J · 1986 to 2016
$18.9M
CENTER FOR NARCOLEPSY AND RELATED DISORDERSP01NS023724 · NINDS · STANFORD UNIVERSITY · PI DEMENT, WILLIAM C · 1987 to 1988
–
NINDS NIH HHS NS23724NINDS NIH HHS P50 NS023724
6 · The paper itself

Abstract

The hypocretin (also known as orexin) neuropeptide system coordinates the regulation of various physiological processes. A reduction in Nr6a1 expression was observed in hypocretin neuron-ablated transgenic mice. To show that prepro-hypocretin transcription is functionally modulated by NR6A1, we performed chromatin immunoprecipitation (ChIP) analysis, double-immunostaining, a luciferase reporter assay, and an in utero electroporation study. ChIP analysis showed that endogenous NR6A1 binds to a putative NR6A1-binding site. Double-immunostaining indicated almost all hypocretin neurons were positive for NR6A1 immunoreactivity. NR6A1 overexpression in SH-SY5Y cells modulated hypocretin promoter activity, an effect that was countered by lacking a putative NR6A1-binding site. Electroporation with Nr6a1 in the foetal hypothalamus promoted hypocretin transcription as compared to GFP-electroporation. These experiments confirmed that NR6A1 works as a regulator for hypocretin transcription.

Indexed as

Gene Expression RegulationAnimalsBase SequenceCell LineDNA Mutational AnalysisHumansHypothalamusImmunoprecipitationIntracellular Signaling Peptides and ProteinsMaleMiceMice, Inbred C57BLMolecular Sequence DataNeuropeptidesNuclear Receptor Subfamily 6, Group A, Member 1OrexinsIntracellular Signaling Peptides and ProteinsNeuropeptidesNuclear Receptor Subfamily 6, Group A, Member 1Orexins

Identifiers

PMID21056546
PMCPMC3012206
OpenAlexW2046920367

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.