Evidence map›Paper›PMID 21055719›Full record

ArticleAmerican journal of human genetics2010

Deletion 17q12 is a recurrent copy number variant that confers high risk of autism and schizophrenia.

Daniel Moreno-De-Luca, SGENE Consortium, Jennifer G Mulle, Simons Simplex Collection Genetics Consortium, Erin B Kaminsky, Stephan J Sanders, GeneSTAR, Scott M Myers, Margaret P Adam, Amy T Pakula and 28 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in American journal of human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 158 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
158citing papers in PubMed, 3 pooled it
20.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

158 citing papers in PubMed, 3 syntheses or guidelines pooled it, 331 citations in OpenAlex.

  1. Autism spectrum disorder and schizophrenia: An updated conceptual review.Autism research : official journal of the International Society for Autism Research · 2022
    Pooled it
  2. Pooled it
  3. Distribution of disease-associated copy number variants across distinct disorders of cognitive development.Journal of the American Academy of Child and Adolescent Psychiatry · 2013
    Pooled it
  4. Clinical kidney journal · 2026
    Review
  5. Article
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  11. In-Depth Phenotyping ofBiomolecules · 2024
    Article
  12. Article
  13. International journal of molecular sciences · 2024
    Review
  14. Article
  15. Renal and Extrarenal Phenotypes in Patients WithKidney international reports · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

98 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

38 authors at 15 institutions in 3 countries.

Daniel Moreno-De-LucaDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA 30322, USA. daniel.morenodeluca@emory.edu
SGENE Consortium
Jennifer G Mulle
Simons Simplex Collection Genetics Consortium
Erin B Kaminsky
Stephan J Sanders
GeneSTAR
Scott M Myers
Margaret P Adam
Amy T Pakula
Nancy J Eisenhauer
Kim Uhas
LuAnn Weik
Lisa Guy
Melanie E Care
Chantal F Morel
Charlotte Boni
Bonnie Anne Salbert
Ashadeep Chandrareddy
Laurie A Demmer
Eva W C Chow
Urvashi Surti
Swaroop Aradhya
Diane L Pickering
Denae M Golden
Warren G Sanger
Emily Aston
Arthur R Brothman
Troy J Gliem
Erik C Thorland
Todd Ackley
Ram Iyer
Shuwen Huang
John C Barber
John A Crolla
Stephen T Warren
Christa L Martin
David H Ledbetter
Emory University · USGeisinger Medical Center · USUniversity of Nebraska Medical Center · USMayo Clinic in Arizona · USSalisbury NHS Foundation Trust · GBTufts Medical Center · USUniversity Health Network · CAARUP Laboratories (United States) · USCenter for Autism and Related Disorders · USChildren's Hospital of Wisconsin · USUniversity of Pittsburgh · USUniversity of Toronto · CAUniversity of Utah · USWessex Regional Genetics Laboratory · GBYale University · US

Funding

A Comprehensive Approach to Identification of Autism Susceptibility GenesR01MH081754 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GESCHWIND, DANIEL H · 2008 to 2012
$14.6M
GENE DOSAGE IMBALANCE IN NEURODEVELOPMENTAL DISORDERSR01MH074090 · NIMH · GEISINGER CLINIC · PI David H. Ledbetter, CHRISTA LESE MARTIN · 2005 to 2026
$13.5M
CNV Atlas of Human DevelopmentRC2HD064525 · NICHD · EMORY UNIVERSITY · PI LEDBETTER, DAVID H., WAPNER, RONALD · 2009 to 2010
$3.4M
Schizophrenia susceptibility by copy number variation in the AshkenazimR01MH080129 · NIMH · EMORY UNIVERSITY · PI WARREN, STEPHEN T. · 2007 to 2011
$3.4M
Isolation of Autism susceptibility genesR01MH071425 · NIMH · DECODE GENETICS, INC. · PI STEFANSSON, KARI · 2006 to 2011
$2.9M
Investigating the Role of Genomic Copy Number Variation in Risk for SchizophreniaF32MH080583 · NIMH · EMORY UNIVERSITY · PI MULLE, JENNIFER GLADYS · 2007 to 2009
$148k
NICHD NIH HHS HD064525NICHD NIH HHS RC2 HD064525NIMH NIH HHS F32 MH080583NIMH NIH HHS MH071425NIMH NIH HHS MH080129NIMH NIH HHS MH080583NIMH NIH HHS MH081754NIMH NIH HHS R01 MH071425NIMH NIH HHS R01 MH074090NIMH NIH HHS R01 MH080129
6 · The paper itself

Abstract

Autism spectrum disorders (ASD) and schizophrenia are neurodevelopmental disorders for which recent evidence indicates an important etiologic role for rare copy number variants (CNVs) and suggests common genetic mechanisms. We performed cytogenomic array analysis in a discovery sample of patients with neurodevelopmental disorders referred for clinical testing. We detected a recurrent 1.4 Mb deletion at 17q12, which harbors HNF1B, the gene responsible for renal cysts and diabetes syndrome (RCAD), in 18/15,749 patients, including several with ASD, but 0/4,519 controls. We identified additional shared phenotypic features among nine patients available for clinical assessment, including macrocephaly, characteristic facial features, renal anomalies, and neurocognitive impairments. In a large follow-up sample, the same deletion was identified in 2/1,182 ASD/neurocognitive impairment and in 4/6,340 schizophrenia patients, but in 0/47,929 controls (corrected p = 7.37 × 10⁻⁵). These data demonstrate that deletion 17q12 is a recurrent, pathogenic CNV that confers a very high risk for ASD and schizophrenia and show that one or more of the 15 genes in the deleted interval is dosage sensitive and essential for normal brain development and function. In addition, the phenotypic features of patients with this CNV are consistent with a contiguous gene syndrome that extends beyond RCAD, which is caused by HNF1B mutations only.

Indexed as

Chromosomes, Human, Pair 17DNA Copy Number VariationsSequence DeletionChildChild Development Disorders, PervasiveChild, PreschoolFaciesFemaleHumansMalePhenotypeSchizophrenia

Identifiers

PMID21055719
PMCPMC2978962
OpenAlexW2152079029

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.