Evidence map›Paper›PMID 21052032›Full record

ArticlePsychiatric genetics2011

Sequence polymorphisms of MC1R gene and their association with depression and antidepressant response.

Gui-Sheng Wu, Huai-Rong Luo, Chuanhui Dong, Claudio Mastronardi, Julio Licinio, Ma-Li Wong

Open access · greenAbstract read
In one paragraph

Article in Psychiatric genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
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  4. Review
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  6. Article
  7. Current issues in molecular biology · 2021
    Article
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  12. Do we need pharmacogenetics to personalize antidepressant therapy?Cellular and molecular life sciences : CMLS · 2013
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Gui-Sheng WuCenter for Drug Screening and Research, State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, The Chinese Academy of Sciences, Yunnan, China.
Huai-Rong Luo
Chuanhui Dong
Claudio Mastronardi
Julio Licinio
Ma-Li Wong
Australian National University · AUChinese Academy of Sciences · CNUniversity of Miami · US

Funding

UCLA PHARMACOGENETICS &PHARMACOGENOMICS RESEARCH GROUPU01GM061394 · NIGMS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LICINIO, JULIO · 2000 to 2005
$4.7M
Pharmacogenetics of Antidepressant DrugsK24RR017365 · NCRR · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI WONG, MA-LI · 2003 to 2007
$727k
NCRR NIH HHS K24 RR017365NIGMS NIH HHS U01 GM061394
6 · The paper itself

Abstract

objectiveMelanocortin 1 receptor (MC1R) is involved in various functions, such as pigmentation, antipyretic and anti-inflammatory actions, development of melanoma, susceptibility to ultraviolet-induced sun damage, modification of oculocutaneous albinism, development of freckles, and mediation of female-specific mechanisms of analgesia. MC1R's natural agonists include α-melanocyte-stimulating hormone and corticotrophin (ACTH1-39), which are important components of hypothalamic pituitary adrenal axis and increase in response to stress. Given the multiple relevant roles of MC1R, we studied whether the MC1R gene would be associated with susceptibility to major depressive disorder or with response to antidepressant treatment.

methodsThe human MC1R gene is highly polymorphic; therefore, we sequenced the entire MC1R coding region of 1122 bp in 181 depressed Mexican-American patients and 185 Mexican-American controls.

resultsA total of 23 single nucleotide polymorphisms (SNPs, 15 known and eight new) were found within the sequenced region. Among the common SNPs, the nonsynonymous SNP, rs885479 (R163Q) was associated with the diagnosis of depression (P=0.04). The nonsynonymous SNP, rs2228479 (V92M) and the synonymous SNP, rs2228478 were found to be associated with the remission with desipramine treatment. No associations were found for remission with fluoxetine treatment or for the combined sample treated with fluoxetine or desipramine. The frequency of one (H2) of the five haplotypes identified was higher in depressed patients when compared with controls (P=0.05). In-silico functional analysis indicates that SNPs rs885479 and rs2228479 have significant impact on the protein function.

conclusionThe MC1R gene might be associated with major depressive disorder and with treatment response to desipramine.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseAntidepressive AgentsBase SequenceDepressionFemaleGene FrequencyHaplotypesHumansMaleMexican AmericansMolecular Sequence DataMutationPolymorphism, Single NucleotideReceptor, Melanocortin, Type 1Remission InductionAntidepressive AgentsReceptor, Melanocortin, Type 1

Identifiers

PMID21052032
PMCPMC9531708
OpenAlexW1964367281

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.