Evidence map›Paper›PMID 21051746›Full record

ArticleClinical journal of the American Society of Nephrology : CJASN2011

Recurrent deep intronic mutations in the SLC12A3 gene responsible for Gitelman's syndrome.

Yi-Fen Lo, Kandai Nozu, Kazumoto Iijima, Takahiro Morishita, Che-Chung Huang, Sung-Sen Yang, Huey-Kang Sytwu, Yu-Wei Fang, Min-Hua Tseng, Shih-Hua Lin

Open access · greenAbstract read
In one paragraph

Article in Clinical journal of the American Society of Nephrology : CJASN, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 66 citations in OpenAlex.

  1. Revisiting the Genetics of Hypophosphatasia.Journal of inherited metabolic disease · 2025
    Review
  2. Review
  3. Novel Intronic Mutations of theInternational journal of general medicine · 2023
    Article
  4. Review
  5. The Contribution ofFrontiers in medicine · 2022
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Clinical Genetic Screening in Adult Patients with Kidney Disease.Clinical journal of the American Society of Nephrology : CJASN · 2020
    Review
  12. Article
  13. Review
  14. Article
  15. Genomic medicine for kidney disease.Nature reviews. Nephrology · 2018
    Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Yi-Fen LoGraduate Institute of Life Sciences, National Defense Medical Center, Taipei, Taiwan.
Kandai Nozu
Kazumoto Iijima
Takahiro Morishita
Che-Chung Huang
Sung-Sen Yang
Huey-Kang Sytwu
Yu-Wei Fang
Min-Hua Tseng
Shih-Hua Lin
National Defense Medical Center · TWTri-Service General Hospital · TWKobe University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

objectivesGitelman's syndrome (GS) is an autosomal recessive renal tubular disorder caused by mutations in the SLC12A3 gene encoding the thiazide-sensitive Na(+)-Cl(-) cotransporter (NCC). Despite meticulous sequencing of genomic DNA, approximately one-third of GS patients are negative or heterozygotes for the known mutations. DESIGN, SETTING, PARTICIPANTS, & MEASUREMENTS: Because blood leukocytes express NCC mRNA, we evaluate whether deep intronic mutations contribute to GS patients with uniallelic or undetectable SLC12A3 mutations. Twenty-nine patients with GS (men/women = 16/13), including eight negative and 21 uniallelic SLC12A3 mutations from 19 unrelated families, and normal controls were enrolled in an academic medical center. Analysis of cDNA from blood leukocytes, sequencing of the corresponding introns of genomic DNA for abnormal transcript, and analysis of NCC protein expression from renal biopsy were performed.

resultsWe identified nine Taiwan aboriginal patients carrying c.1670-191C→T mutations in intron 13 and 10 nonaboriginal patients carrying c.2548+253C→T mutations in intron 21 from 14 families (14/19). These two mutations undetected in 100 healthy subjects created pseudoexons containing new premature termination codons. Haplotype analysis with markers flanking SLC12A3 revealed that both mutations did not have founder effects. Apical NCC expression in the DCT of renal tissue was markedly diminished in two patients carrying deep intronic mutations.

conclusionsDeep intronic mutations in SLC12A3 causing defective NCC expression can be identified with the RNA-based approach in patients with GS. c.1670-191C→T and c.2548+253C→T are hot spot mutations that can be screened in GS patients with uniallelic or negative SLC12A3 mutations.

Indexed as

IntronsMutationAcademic Medical CentersAdultBase SequenceBiopsyCase-Control StudiesDNA Mutational AnalysisFemaleGenetic Predisposition to DiseaseGitelman SyndromeHaplotypesHumansKidneyMaleMiddle AgedReceptors, DrugSLC12A3 protein, humanSolute Carrier Family 12, Member 3Symporters

Identifiers

PMID21051746
PMCPMC3082423
OpenAlexW2170410084

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.