ArticleNucleic acids research2011
FGDB: revisiting the genome annotation of the plant pathogen Fusarium graminearum.
Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.
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Who cites it
49 citing papers in PubMed.
- CusProSe: a customizable protein annotation software with an application to the prediction of fungal secondary metabolism genes.Scientific reports · 2023Article
- Genome-wide association study for deoxynivalenol production and aggressiveness in wheat and rye head blight by resequencing 92 isolates of Fusarium culmorum.BMC genomics · 2021Article
- Infection cushions of Fusarium graminearum are fungal arsenals for wheat infection.Molecular plant pathology · 2020Article
- Pathogenicity and Virulence Factors ofMicroorganisms · 2020Review
- Fusarium Toxins in Chinese Wheat since the 1980s.Toxins · 2019Review
- Different Hydrophobins ofFrontiers in microbiology · 2019Article
- Biochemical Characterization of theFrontiers in plant science · 2019Article
- Expression of a Structural Protein of the Mycovirus FgV-ch9 Negatively Affects the Transcript Level of a Novel Symptom Alleviation Factor and Causes Virus Infection-Like Symptoms in Fusarium graminearum.Journal of virology · 2018Article
- Genome-wide functional characterization of putative peroxidases in the head blight fungus Fusarium graminearum.Molecular plant pathology · 2018Article
- High-resolution mapping of the recombination landscape of the phytopathogen Fusarium graminearum suggests two-speed genome evolution.Molecular plant pathology · 2018Article
- Population genomics of Fusarium graminearum reveals signatures of divergent evolution within a major cereal pathogen.PloS one · 2018Article
- Architecture and Distribution of Introns in Core Genes of FourG3 (Bethesda, Md.) · 2017Article
- The ancestral levels of transcription and the evolution of sexual phenotypes in filamentous fungi.PLoS genetics · 2017Article
- Landscape of genomic diversity and host adaptation in Fusarium graminearum.BMC genomics · 2017Article
- Genome-wide exonic small interference RNA-mediated gene silencing regulates sexual reproduction in the homothallic fungus Fusarium graminearum.PLoS genetics · 2017Article
- Comparative "Omics" of the Fusarium fujikuroi Species Complex Highlights Differences in Genetic Potential and Metabolite Synthesis.Genome biology and evolution · 2016Article
- Functional Analysis of the Fusarielin Biosynthetic Gene Cluster.Molecules (Basel, Switzerland) · 2016Article
- Whole genome sequencing and comparative genomics of closely related Fusarium Head Blight fungi: Fusarium graminearum, F. meridionale and F. asiaticum.BMC genomics · 2016Article
- Compartmentalized gene regulatory network of the pathogenic fungus Fusarium graminearum.The New phytologist · 2016Article
- Heat shock protein 90 is required for sexual and asexual development, virulence, and heat shock response in Fusarium graminearum.Scientific reports · 2016Article
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Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The MIPS Fusarium graminearum Genome Database (FGDB) was established as a comprehensive genome database on one of the most devastating fungal plant pathogens of wheat, barley and maize. The current version of FGDB v3.1 provides information on the full manually revised gene set based on the Broad Institute assembly FG3 genome sequence. The results of gene prediction tools were integrated with the help of comparative data on related species to result in a set of 13.718 annotated protein coding genes. This rigorous approach involved adding or modifying gene models and represents a coding sequence gold standard for the genus Fusarium. The gene loci improvements results in 2461 genes which either are new or have different structures compared to the Broad Institute assembly 3 gene set. Moreover the database serves as a convenient entry point to explore expression data results and to obtain information on the Affymetrix GeneChip probe sets. The resource is accessible on http://mips.gsf.de/genre/proj/FGDB/.
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