Evidence map›Paper›PMID 21048029›Full record

ArticleAmerican journal of physiology. Renal physiology2011

Midkine, a heparin-binding protein, is increased in the diabetic mouse kidney postmenopause.

Maggie K Diamond-Stanic, Melissa J Romero-Aleshire, Patricia B Hoyer, Kevin Greer, James B Hoying, Heddwen L Brooks

Abstract read
In one paragraph

Article in American journal of physiology. Renal physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Guidelines on antibody use in physiology research.American journal of physiology. Renal physiology · 2024
    Article
  3. Ubiquitin-Specific Proteases (USPs) and Metabolic Disorders.International journal of molecular sciences · 2023
    Review
  4. Review
  5. Review
  6. Article
  7. Article
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  9. Review
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Maggie K Diamond-StanicDepartment of Physiology, College of Medicine, University of Arizona, 1656 E. Mabel St., Tucson, AZ 85724, USA.
Melissa J Romero-Aleshire
Patricia B Hoyer
Kevin Greer
James B Hoying
Heddwen L Brooks
University of Arizona · US

Funding

SOUTHWEST ENVIRONMENTAL HEALTH SCIENCES CENTERP30ES006694 · NIEHS · UNIVERSITY OF ARIZONA · PI Paloma Inés Beamer · 1994 to 2026
$36.7M
Ovary Intact Murine Model for MenopauseR01AG021948 · NIA · UNIVERSITY OF ARIZONA · PI HOYER, PATRICIA B · 2003 to 2007
$1.6M
Role of vasopressin in regulating renal medullary gene expressionR01DK073611 · NIDDK · UNIVERSITY OF ARIZONA · PI BROOKS, HEDDWEN L · 2007 to 2011
$1.4M
NIA NIH HHS R01 AG-021948NIDDK NIH HHS R01 DK-073611NIEHS NIH HHS P30 ES-006694NIEHS NIH HHS P30 ES006694
6 · The paper itself

Abstract

Estrogen is thought to protect against the development of chronic kidney disease, and menopause increases the development and severity of diabetic kidney disease. In this study, we used streptozotocin (STZ) to induce diabetes in the 4-vinylcyclohexene diepoxide (VCD)-treated mouse model of menopause. DNA microarrays were used to identify gene expression changes in the diabetic kidney postmenopause. An ANOVA model, CARMA, was used to isolate the menopause effect between two groups of diabetic mice, diabetic menopausal (STZ/VCD) and diabetic cycling (STZ). In this diabetic study, 8,864 genes of the possible 15,600 genes on the array were included in the ANOVA; 99 genes were identified as demonstrating a >1.5-fold up- or downregulation between the STZ/VCD and STZ groups. We randomly selected genes for confirmation by real-time PCR; midkine (Mdk), immediate early response gene 3 (IEX-1), mitogen-inducible gene 6 (Mig6), and ubiquitin-specific protease 2 (USP2) were significantly increased in the kidneys of STZ/VCD compared with STZ mice. Western blot analysis confirmed that Mdk and IEX-1 protein abundance was significantly increased in the kidney cortex of STZ/VCD compared with STZ mice. In a separate study, DNA microarrays and CARMA analysis were used to identify the effect of menopause on the nondiabetic kidney; VCD-treated mice were compared with cycling mice. Of the possible 15,600 genes on the array, 9,142 genes were included in the ANOVA; 20 genes were identified as demonstrating a >1.5-fold up- or downregulation; histidine decarboxylase and vanin 1 were among the genes identified as differentially expressed in the postmenopausal nondiabetic kidney. These data expand our understanding of how hormone status correlates with the development of diabetic kidney disease and identify several target genes for further studies.

Indexed as

AnimalsCyclohexenesCytokinesDiabetes Mellitus, ExperimentalDiabetic NephropathiesFemaleGene Expression ProfilingImmediate-Early ProteinsMiceMidkineOligonucleotide Array Sequence AnalysisPerimenopausePostmenopauseUp-RegulationVinyl Compounds4-vinyl-1-cyclohexene dioxideCyclohexenesCytokinesIEX-1 protein, mouseImmediate-Early ProteinsMidkineVinyl Compounds

Identifiers

PMID21048029
PMCPMC3023219
OpenAlexW2035687462

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.