Evidence map›Paper›PMID 21047413›Full record

ArticleBMC microbiology2010

Development and validation of a FACS-based lipoprotein localization screen in the Lyme disease spirochete Borrelia burgdorferi.

Ozan S Kumru, Ryan J Schulze, Joyce G Slusser, Wolfram R Zückert

Open access · goldAbstract readValidation Study
In one paragraph

Article in BMC microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Genetic Manipulation ofCurrent issues in molecular biology · 2021
    Review
  3. Protein Secretion in Spirochetes.Microbiology spectrum · 2019
    Article
  4. Article
  5. Article
  6. Article
  7. Tracking Proteins Secreted by Bacteria: What's in the Toolbox?Frontiers in cellular and infection microbiology · 2017
    Review
  8. The leptospiral outer membrane.Current topics in microbiology and immunology · 2015
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Genetic Manipulation of Borrelia Spp.Current topics in microbiology and immunology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Ozan S KumruDepartment of Microbiology, Molecular Genetics and Immunology, University of Kansas Medical Center, Mail Stop 3029, 3901 Rainbow Boulevard, Kansas City, KS 66160, USA.
Ryan J Schulze
Joyce G Slusser
Wolfram R Zückert
University of Kansas Medical Center · USUniversity of Bristol · GB

Funding

Lipoprotein Transport in Borrelia SpirochetesR01AI063261 · NIAID · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ZUECKERT, WOLFRAM R · 2006 to 2010
$1.8M
NIAID NIH HHS AI063261
6 · The paper itself

Abstract

backgroundIn our previous studies on lipoprotein secretion in the Lyme disease spirochete Borrelia burgdorferi, we used monomeric red fluorescent protein 1 (mRFP1) fused to specifically mutated outer surface protein A (OspA) N-terminal lipopeptides to gather first insights into lipoprotein sorting determinants. OspA:mRFP1 fusions could be detected by epifluorescence microscopy both in the periplasm and on the bacterial surface. To build on these findings and to complement the prior targeted mutagenesis approach, we set out to develop a screen to probe a random mutagenesis expression library for mutants expressing differentially localized lipoproteins.

resultsA Glu-Asp codon pair in the inner membrane-localized OspA20:mRFP1 fusion was chosen for mutagenesis since the two negative charges were previously shown to define the phenotype. A library of random mutants in the two codons was generated and expressed in B. burgdorferi. In situ surface proteolysis combined with fluorescence activated cell sorting (FACS) was then used to screen for viable spirochetes expressing alternative subsurface OspA:mRFP1 fusions. Analysis of 93 clones randomly picked from a sorted cell population identified a total of 43 distinct mutants. Protein localization assays indicated a significant enrichment in the selected subsurface phenotype. Interestingly, a majority of the subsurface mutant proteins localized to the outer membrane, indicating their impairment in "flipping" through the outer membrane to the spirochetal surface. OspA20:mRFP1 remained the protein most restricted to the inner membrane.

conclusionsTogether, these results validate this FACS-based screen for lipoprotein localization and suggest a rather specific inner membrane retention mechanism involving membrane anchor-proximal negative charge patches in this model B. burgdorferi lipoprotein system.

Indexed as

Antigens, SurfaceBacterial Outer Membrane ProteinsBacterial VaccinesBorrelia burgdorferiFlow CytometryLipoproteinsLyme DiseaseProtein TransportAntigens, SurfaceBacterial Outer Membrane ProteinsBacterial VaccinesLipoproteinsOspA protein

Identifiers

PMID21047413
PMCPMC2987989
OpenAlexW2163923048

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.