Evidence map›Paper›PMID 21045553›Full record

ArticleRNA biology

The twenty-nine amino acid C-terminal cytoplasmic domain of poliovirus 3AB is critical for nucleic acid chaperone activity.

Divya R Gangaramani, Elizabeth L Eden, Manthan Shah, Jeffrey J Destefano

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Divya R GangaramaniDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD, USA.
Elizabeth L Eden
Manthan Shah
Jeffrey J Destefano
University of Maryland, College Park · US

Funding

MECHANISM OF RECOMBINATION BY HIV REVERSE TRANSCRIPTASER01GM051140 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI DESTEFANO, JEFFREY J · 2000 to 2011
$3.0M
MECHANISM OF RECOMBINATION BY HIV REVERSE TRANSCRIPTASER29GM051140 · NIGMS · UNIVERSITY OF MARYLAND COLLEGE PK CAMPUS · PI DESTEFANO, JEFFREY J · 1994 to 1998
–
Howard Hughes Medical InstituteNIGMS NIH HHS GM051140NIGMS NIH HHS R01 GM051140NIGMS NIH HHS R29 GM051140
6 · The paper itself

Abstract

Poliovirus 3AB protein is the first picornavirus protein demonstrated to have nucleic acid chaperone activity. Further characterization of 3AB demonstrates that the C-terminal 22 amino acids (3B region (also referred to as VPg), amino acid 88-109) of the protein is required for chaperone activity, as mutations in this region abrogate nucleic acid binding and chaperone function. Protein 3B alone has no chaperone activity as determined by established assays that include the ability to stimulate nucleic acid hybridization in a primer-template annealing assay, helix-destabilization in a nucleic acid unwinding assay, or aggregation of nucleic acids. In contrast, the putative 3AB C-terminal cytoplasmic domain (C terminal amino acids 81-109, 3B + the last 7 C-terminal amino acids of 3A, termed 3B+7 in this report) possesses strong activity in these assays, albeit at much higher concentrations than 3AB. The characteristics of several mutations in 3B+7 are described here, as well as a model proposing that 3B+7 is the site of the "intrinsic" chaperone activity of 3AB while the 3A N-terminal region (amino acids 1-58) and/or membrane anchor domain (amino acids 59-80) serve to increase the effective concentration of the 3B+7 region leading to the potent chaperone activity of 3AB.

Indexed as

Amino AcidsAmino Acid SequenceBase SequenceCytoplasmMembrane ProteinsModels, BiologicalMolecular ChaperonesMolecular Sequence DataMutationNucleic Acid ConformationNucleic AcidsPoliovirusProtein Structure, TertiaryRNA-Binding ProteinsViral Nonstructural ProteinsVirus Replication3AB protein, poliovirusAmino AcidsMembrane ProteinsMolecular ChaperonesNucleic AcidsRNA-Binding ProteinsViral Nonstructural Proteins

Identifiers

PMID21045553
PMCPMC3072266
OpenAlexW2059634616

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.