Evidence map›Paper›PMID 21045540›Full record

ReviewRNA biology

RNA remodeling and gene regulation by cold shock proteins.

Sangita Phadtare, Konstantin Severinov

Open access · bronzeAbstract readReview
In one paragraph

Review in RNA biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 164 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Role of cold shock proteins B and D inInfection and immunity · 2024
    Article
  11. The DNA damage response ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Review
  13. Article
  14. Article
  15. Temperature Matters: Bacterial Response to Temperature Change.Journal of microbiology (Seoul, Korea) · 2023
    Review
  16. Molecular characterization ofFrontiers in microbiology · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. Regulation of Ribonuclease J Expression inJournal of bacteriology · 2022
    Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sangita PhadtareDepartment of Biochemistry, Robert Wood Johnson Medical School, UMDNJ, CABM, Piscataway, NJ, USA.
Konstantin Severinov
Rutgers, The State University of New Jersey · US

Funding

PHS HHS R01 64530PHS HHS R03 76900
6 · The paper itself

Abstract

One of the many important consequences that temperature down-shift has on cells is stabilization of secondary structures of RNAs. This stabilization has wide-spread effects, such as inhibition of expression of several genes due to termination of their transcription and inefficient RNA degradation that adversely affect cell growth at low temperature. Several cold shock proteins are produced to counteract these effects and thus allow cold acclimatization of the cell. The main RNA modulating cold shock proteins of E. coli can be broadly divided into two categories, (1) the CspA family proteins, which mainly affect the transcription and possibly translation at low temperature through their RNA chaperoning function and (2) RNA helicases and exoribonucleases that stimulate RNA degradation at low temperature through their RNA unwinding activity.

Indexed as

Gene Expression RegulationCold Shock Proteins and PeptidesEscherichia coliEscherichia coli ProteinsExoribonucleasesHeat-Shock ProteinsQuorum SensingRNARNA HelicasesTemperatureCold Shock Proteins and PeptidesCspA protein, E coliEscherichia coli ProteinsExoribonucleasesHeat-Shock ProteinsRNARNA Helicases

Identifiers

PMID21045540
PMCPMC3073336
OpenAlexW2052262880

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.