Evidence map›Paper›PMID 21045057›Full record

ArticleNucleic acids research2011

Ensembl 2011.

Paul Flicek, M Ridwan Amode, Daniel Barrell, Kathryn Beal, Simon Brent, Yuan Chen, Peter Clapham, Guy Coates, Susan Fairley, Stephen Fitzgerald and 42 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 435 papers.

0numbers the graph read from it
0cells of the map it votes in
435citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

435 citing papers in PubMed.

  1. Article
  2. Article
  3. Drug repurposing for cancer therapy.Signal transduction and targeted therapy · 2024
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. PlantCHRs: A comprehensive database of plant chromatin remodeling factors.Computational and structural biotechnology journal · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Updated Genome Assembly of Bighead Carp (Frontiers in genetics · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Article

375 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

52 authors.

Paul FlicekEuropean Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. flicek@ebi.ac.uk
M Ridwan Amode
Daniel Barrell
Kathryn Beal
Simon Brent
Yuan Chen
Peter Clapham
Guy Coates
Susan Fairley
Stephen Fitzgerald
Leo Gordon
Maurice Hendrix
Thibaut Hourlier
Nathan Johnson
Andreas Kähäri
Damian Keefe
Stephen Keenan
Rhoda Kinsella
Felix Kokocinski
Eugene Kulesha
Pontus Larsson
Ian Longden
William McLaren
Bert Overduin
Bethan Pritchard
Harpreet Singh Riat
Daniel Rios
Graham R S Ritchie
Magali Ruffier
Michael Schuster
Daniel Sobral
Giulietta Spudich
Y Amy Tang
Stephen Trevanion
Jana Vandrovcova
Albert J Vilella
Simon White
Steven P Wilder
Amonida Zadissa
Jorge Zamora
Bronwen L Aken
Ewan Birney
Fiona Cunningham
Ian Dunham
Richard Durbin
Xosé M Fernández-Suarez
Javier Herrero
Tim J P Hubbard
Anne Parker
Glenn Proctor
Jan Vogel
Stephen M J Searle

Funding

Biotechnology and Biological Sciences Research Council BB/E011640/1Biotechnology and Biological Sciences Research Council BBS/B/13438Wellcome Trust 062023Wellcome Trust 077198
6 · The paper itself

Abstract

The Ensembl project (http://www.ensembl.org) seeks to enable genomic science by providing high quality, integrated annotation on chordate and selected eukaryotic genomes within a consistent and accessible infrastructure. All supported species include comprehensive, evidence-based gene annotations and a selected set of genomes includes additional data focused on variation, comparative, evolutionary, functional and regulatory annotation. The most advanced resources are provided for key species including human, mouse, rat and zebrafish reflecting the popularity and importance of these species in biomedical research. As of Ensembl release 59 (August 2010), 56 species are supported of which 5 have been added in the past year. Since our previous report, we have substantially improved the presentation and integration of both data of disease relevance and the regulatory state of different cell types.

Indexed as

Databases, GeneticGenomicsAnimalsGenetic VariationHumansMiceMolecular Sequence AnnotationRatsRegulatory Sequences, Nucleic AcidSoftwareZebrafish

Identifiers

PMID21045057
PMCPMC3013672

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.