Evidence map›Paper›PMID 21044963›Full record

ArticleThe Journal of biological chemistry2011

The RNA binding motif protein 15B (RBM15B/OTT3) is a functional competitor of serine-arginine (SR) proteins and antagonizes the positive effect of the CDK11p110-cyclin L2α complex on splicing.

Pascal Loyer, Adeline Busson, Janeen H Trembley, Judith Hyle, Jose Grenet, Wei Zhao, Catherine Ribault, Tristan Montier, Vincent J Kidd, Jill M Lahti

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Global Co-regulatory Cross Talk Between mMolecular neurobiology · 2025
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  4. Review
  5. Article
  6. Prognostic value of comprehensive typing based on m6A and gene cluster in TNBC.Journal of cancer research and clinical oncology · 2023
    Article
  7. Review
  8. Article
  9. Article
  10. NFrontiers in immunology · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Pascal LoyerINSERM UMR 991 Foie, Métabolismes et Cancer, IFR140, Université de Rennes 1, Hôpital Pontchaillou, 35033 Rennes, France.
Adeline Busson
Janeen H Trembley
Judith Hyle
Jose Grenet
Wei Zhao
Catherine Ribault
Tristan Montier
Vincent J Kidd
Jill M Lahti
Inserm · FRSt. Jude Children's Research Hospital · USUniversité de Bretagne Occidentale · FRUniversité de Rennes · FR

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SUZANNE J. BAKER · 1985 to 2026
$166.9M
STRUCTURE/FUNCTION OF PITSLRE KINASESR01GM044088 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI LAHTI, JILL M · 1991 to 2010
$2.2M
NCI NIH HHS P30 CA021765NCI NIH HHS P30CA021765NIGMS NIH HHS R01 GM044088NIGMS NIH HHS R01GM044088
6 · The paper itself

Abstract

Here, we report the identification of the RNA binding motif protein RBM15B/OTT3 as a new CDK11(p110) binding partner that alters the effects of CDK11 on splicing. RBM15B was initially identified as a binding partner of the Epstein-Barr virus mRNA export factor and, more recently, as a cofactor of the nuclear export receptor NXF1. In this study, we found that RBM15B co-elutes with CDK11(p110), cyclin L2α, and serine-arginine (SR) proteins, including SF2/ASF, in a large nuclear complex of ∼1-MDa molecular mass following size exclusion chromatography. Using co-immunoprecipitation experiments and in vitro pulldown assays, we mapped two distinct domains of RBM15B that are essential for its direct interaction with the N-terminal extension of CDK11(p110), cyclin L2α, and SR proteins such as 9G8 and SF2/ASF. Finally, we established that RBM15B is a functional competitor of the SR proteins SF2/ASF and 9G8, inhibits formation of the functional spliceosomal E complex, and antagonizes the positive effect of the CDK11(p110)-cyclin L2α complex on splicing both in vitro and in vivo.

Indexed as

RNA SplicingAnimalsBinding, CompetitiveCell NucleusCyclin-Dependent KinasesCyclinsHEK293 CellsHumansNuclear ProteinsNucleocytoplasmic Transport ProteinsProtein Structure, TertiaryProtein TransportRNA-Binding ProteinsRNA, MessengerSerine-Arginine Splicing FactorsSpliceosomesCyclin-Dependent KinasesCyclinsNuclear ProteinsNucleocytoplasmic Transport ProteinsRNA-Binding ProteinsRNA, MessengerSerine-Arginine Splicing Factors

Identifiers

PMID21044963
PMCPMC3012969
OpenAlexW1976776005

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.