Evidence map›Paper›PMID 21044070›Full record

ArticleJournal of neurochemistry2010

Locus-wide identification of Egr2/Krox20 regulatory targets in myelin genes.

Sung-Wook Jang, Rajini Srinivasan, Erin A Jones, Guannan Sun, Sunduz Keles, Courtney Krueger, Li-Wei Chang, Rakesh Nagarajan, John Svaren

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of neurochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Role of theBiomedicines · 2024
    Article
  3. EGR3 Inhibits Tumor Progression by Inducing Schwann Cell-Like Differentiation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  4. Article
  5. Article
  6. Peripheral Nerve Development and the Pathogenesis of Peripheral Neuropathy: the Sorting Point.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2021
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. YAP and TAZ RegulateFrontiers in molecular neuroscience · 2019
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Sung-Wook JangProgram in Cellular and Molecular Biology, University of Wisconsin-Madison, Madison, Wisconsin 53705, USA.
Rajini Srinivasan
Erin A Jones
Guannan Sun
Sunduz Keles
Courtney Krueger
Li-Wei Chang
Rakesh Nagarajan
John Svaren
University of Wisconsin–Madison · USWashington University in St. Louis · US

Funding

WISCONSIN CENTER ON MENTAL RETARDATION: CORE SUPPORTP30HD003352 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI MESSING, ALBEE · 1985 to 2015
$25.2M
Statistical Methods for the Analysis of ChlP-chip DataR01HG003747 · NHGRI · UNIVERSITY OF WISCONSIN-MADISON · PI KELES, SUNDUZ · 2007 to 2024
$4.8M
Genetic Control of Myelination by EGR2 and NAB proteinsR01HD041590 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI SVAREN, JOHN P · 2002 to 2011
$2.8M
NHGRI NIH HHS HG03747NHGRI NIH HHS R01 HG003747NICHD NIH HHS HD41590NICHD NIH HHS P30 HD003352NICHD NIH HHS P30 HD03352NICHD NIH HHS R01 HD041590
6 · The paper itself

Abstract

Myelination of peripheral nerves by Schwann cells depends upon a gene regulatory network controlled by early growth response Egr2/Krox20, which is specifically required for Schwann cells to initiate and maintain myelination. To elucidate the mechanism by which Egr2 regulates gene expression during myelination, we have performed chromatin immunoprecipitation analysis on myelinating rat sciatic nerve in vivo. The resulting samples were applied to a tiled microarray consisting of a broad spectrum of genes that are activated or repressed in Egr2-deficient mice. The results show extensive binding within myelin-associated genes, as well as some genes that become repressed in myelinating Schwann cells. Many of the Egr2 peaks coincide with regions of open chromatin, which is a marker of enhancer regions. In addition, further analysis showed that there is substantial colocalization of Egr2 binding with Sox10, a transcription factor required for Schwann cell specification and other stages of Schwann cell development. Finally, we have found that Egr2 binds to promoters of several lipid biosynthetic genes, which is consistent with their dramatic up-regulation during the formation of lipid-rich myelin. Overall, this analysis provides a locus-wide profile of Egr2 binding patterns in major myelin-associated genes using myelinating peripheral nerve.

Indexed as

AnimalsAnimals, NewbornCell Line, TumorEarly Growth Response Protein 2Ether-A-Go-Go Potassium ChannelsGene Expression RegulationGene TargetingGenetic LociMelanoma, ExperimentalMiceMyelin SheathRatsRats, Sprague-DawleySciatic NerveEarly Growth Response Protein 2Ether-A-Go-Go Potassium ChannelsKcnh6 protein, rat

Identifiers

PMID21044070
PMCPMC3260055
OpenAlexW1486848541

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.