Evidence map›Paper›PMID 21042588›Full record

ArticlePloS one2010

Regional mucosa-associated microbiota determine physiological expression of TLR2 and TLR4 in murine colon.

Yunwei Wang, Suzanne Devkota, Mark W Musch, Bana Jabri, Cathryn Nagler, Dionysios A Antonopoulos, Alexander Chervonsky, Eugene B Chang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 130 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The role of animal hosts in shaping gut microbiome variation.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Profiling of the Bacterial Microbiota along the Murine Alimentary Tract.International journal of molecular sciences · 2022
    Article
  12. Review
  13. Article
  14. Article
  15. Dynamic progression of the calf's microbiome and its influence on host health.Computational and structural biotechnology journal · 2021
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yunwei WangDepartment of Medicine, Knapp Center for Biomedical Discovery, University of Chicago, Chicago, Illinois, United States of America.
Suzanne Devkota
Mark W Musch
Bana Jabri
Cathryn Nagler
Dionysios A Antonopoulos
Alexander Chervonsky
Eugene B Chang
University of Chicago · USArgonne National Laboratory · US

Funding

ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI BARREIRO, LUIS BRUNO · 1990 to 2025
$29.8M
The Role of the Gut Microbiota in Ulcerative ColitisUH3DK083993 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHANG, EUGENE B, MEYER, FOLKER · 2010 to 2012
$8.2M
Cytoprotective Role of Heat Shock Proteins in IBDR37DK047722 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 2008 to 2017
$3.8M
The Role of the Gut Microbiota in Ulcerative ColitisUH2DK083993 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHANG, EUGENE B, MEYER, FOLKER · 2009 to 2009
$1.1M
Technologies for the discovery of novel human colonic mucosal-associated microbesR21HG004858 · NHGRI · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 2008 to 2009
$414k
Effect of W-3 supplementation on IBD via alterations in the enteric microbiomeF31AT006073 · NCCIH · UNIVERSITY OF CHICAGO · PI DEVKOTA, SUZANNE · 2010 to 2011
$83k
NCCIH NIH HHS F31 AT006073NCCIH NIH HHS F31 AT006073-01NHGRI NIH HHS HG004858NHGRI NIH HHS R21 HG004858NIDDK NIH HHS DK083993NIDDK NIH HHS DK-42086NIDDK NIH HHS P30 DK042086NIDDK NIH HHS R37 DK047722NIDDK NIH HHS R37 DK47722NIDDK NIH HHS UH2 DK083993NIDDK NIH HHS UH3 DK083993
6 · The paper itself

Abstract

Many colonic mucosal genes that are highly regulated by microbial signals are differentially expressed along the rostral-caudal axis. This would suggest that differences in regional microbiota exist, particularly mucosa-associated microbes that are less likely to be transient. We therefore explored this possibility by examining the bacterial populations associated with the normal proximal and distal colonic mucosa in context of host Toll-like receptors (TLR) expression in C57BL/6J mice housed in specific pathogen-free (SPF) and germ-free (GF) environments. 16S rRNA gene-based terminal restriction fragment length polymorphism (T-RFLP) and clone library analysis revealed significant differences in the community structure and diversity of the mucosa-associated microbiota located in the distal colon compared to proximal colon and stool, the latter two clustering closely. Differential expression of colonic TLR2 and TLR4 along the proximal-distal axis was also found in SPF mice, but not in GF mice, suggesting that enteric microbes are essential in maintaining the regional expression of these TLRs. TLR2 is more highly expressed in proximal colon and decreases in a gradient to distal while TLR4 expression is highest in distal colon and a gradient of decreased expression to proximal colon is observed. After transfaunation in GF mice, both regional colonization of mucosa-associated microbes and expression of TLRs in the mouse colon were reestablished. In addition, exposure of the distal colon to cecal (proximal) microbiota induced TLR2 expression. These results demonstrate that regional colonic mucosa-associated microbiota determine the region-specific expression of TLR2 and TLR4. Conversely, region-specific host assembly rules are essential in determining the structure and function of mucosa-associated microbial populations. We believe this type of host-microbial mutualism is pivotal to the maintenance of intestinal and immune homeostasis.

Indexed as

AnimalsCluster AnalysisIntestinal MucosaMicePolymorphism, Restriction Fragment LengthRNA, Ribosomal, 16SToll-Like Receptor 2Toll-Like Receptor 4RNA, Ribosomal, 16SToll-Like Receptor 2Toll-Like Receptor 4

Identifiers

PMID21042588
PMCPMC2962643
OpenAlexW2039337032

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.