Evidence map›Paper›PMID 21041670›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Role of tyrosyl-DNA phosphodiesterase (TDP1) in mitochondria.

Benu Brata Das, Thomas S Dexheimer, Kasthuraiah Maddali, Yves Pommier

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 135 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Decoding mitochondrial DNA damage and repair associated withFrontiers in cellular and infection microbiology · 2024
    Review
  6. Review
  7. Article
  8. Article
  9. Dynamic features of human mitochondrial DNA maintenance and transcription.Frontiers in cell and developmental biology · 2022
    Review
  10. The Mitochondrial Response to DNA Damage.Frontiers in cell and developmental biology · 2021
    Review
  11. Review
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Review
  18. Twist and Turn-Topoisomerase Functions in Mitochondrial DNA Maintenance.International journal of molecular sciences · 2019
    Review
  19. An Evolutionary View ofFrontiers in cellular and infection microbiology · 2019
    Review
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Benu Brata DasLaboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892-4255, USA.
Thomas S Dexheimer
Kasthuraiah Maddali
Yves Pommier
Center for Cancer Research · USNational Institutes of Health · US

Funding

DNA Repair, Cell Cycle Checkpoints and Apoptosis as Targets for Anticancer DrugsZIABC006150 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI POMMIER, YVES · 2009 to 2025
$23.0M
Intramural NIH HHS
6 · The paper itself

Abstract

Human tyrosyl-DNA phosphodiesterase (TDP1) hydrolyzes the phosphodiester bond at a DNA 3'-end linked to a tyrosyl moiety and has been implicated in the repair of topoisomerase I (Top1)-DNA covalent complexes. TDP1 can also hydrolyze other 3'-end DNA alterations including 3'-phosphoglycolate and 3'-abasic sites, and exhibits 3'-nucleosidase activity indicating it may function as a general 3'-end-processing DNA repair enzyme. Here, using laser confocal microscopy, subcellular fractionation and biochemical analyses we demonstrate that a fraction of the TDP1 encoded by the nuclear TDP1 gene localizes to mitochondria. We also show that mitochondrial base excision repair depends on TDP1 activity and provide evidence that TDP1 is required for efficient repair of oxidative damage in mitochondrial DNA. Together, our findings provide evidence for TDP1 as a novel mitochondrial enzyme.

Indexed as

AnimalsBase SequenceCell ExtractsCell Line, TumorDNA DamageDNA Ligase ATPDNA LigasesDNA, MitochondrialDNA RepairHumansMiceMitochondriaMolecular Sequence DataOxidative StressPhosphoric Diester HydrolasesPoly-ADP-Ribose Binding ProteinsCell ExtractsDNA Ligase ATPDNA ligase III alpha protein, XenopusDNA LigasesDNA, MitochondrialPhosphoric Diester HydrolasesPoly-ADP-Ribose Binding ProteinsTDP1 protein, humanTdp1 protein, mouseXenopus Proteins

Identifiers

PMID21041670
PMCPMC2993338
OpenAlexW2061083265

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.