Evidence map›Paper›PMID 21041408›Full record

ArticleGenes & development2010

The U2AF35-related protein Urp contacts the 3' splice site to promote U12-type intron splicing and the second step of U2-type intron splicing.

Haihong Shen, Xuexiu Zheng, Stephan Luecke, Michael R Green

Abstract read
In one paragraph

Article in Genes & development, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

63 citing papers in PubMed.

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  16. Article
  17. iScience · 2022
    Article
  18. Sex-BiasedCancer discovery · 2022
    Article
  19. RNA-binding proteins of COSMIC importance in cancer.The Journal of clinical investigation · 2021
    Review
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Haihong ShenDepartment of Life Science, Gwangju Institute of Science and Technology, Gwangju 500-712, Korea. haihongshen@gist.ac.kr
Xuexiu Zheng
Stephan Luecke
Michael R Green

Funding

SPLICING OF MRNA PRECURSORSR01GM035490 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI GREEN, MICHAEL R · 1985 to 2021
$4.7M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM035490NIGMS NIH HHS R01GM035490
6 · The paper itself

Abstract

The U2AF35-related protein Urp has been implicated previously in splicing of the major class of U2-type introns. Here we show that Urp is also required for splicing of the minor class of U12-type introns. Urp is recruited in an ATP-dependent fashion to the U12-type intron 3' splice site, where it promotes formation of spliceosomal complexes. Remarkably, Urp also contacts the 3' splice site of a U2-type intron, but in this case is specifically required for the second step of splicing. Thus, through recognition of a common splicing element, Urp facilitates distinct steps of U2- and U12-type intron splicing.

Indexed as

RNA SplicingAmino Acid SequenceAnimalsHeLa CellsHumansImmunoblottingIntronsMolecular Sequence DataNuclear ProteinsPhylogenyRibonucleoproteinsRNA InterferenceRNA, Small NuclearRNA Splice SitesSpliceosomesSplicing Factor U2AFNuclear ProteinsRibonucleoproteinsRNA, Small NuclearRNA Splice SitesSplicing Factor U2AFU12 small nuclear RNAU2AF1 protein, humanU2 small nuclear RNAZRSR2 protein, human

Identifiers

PMID21041408
PMCPMC2964749

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.