Evidence map›Paper›PMID 21035159›Full record

ArticleVirology2011

Early gene expression events in ferrets in response to SARS coronavirus infection versus direct interferon-alpha2b stimulation.

Ali Danesh, Cheryl M Cameron, Alberto J León, Longsi Ran, Luoling Xu, Yuan Fang, Alyson A Kelvin, Thomas Rowe, Honglin Chen, Yi Guan and 3 more

Abstract read
In one paragraph

Article in Virology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 51 citations in OpenAlex.

  1. Trial
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  6. Inflammation, immunity and potential target therapy of SARS-COV-2: A total scale analysis review.Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association · 2021
    Review
  7. Article
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  15. Article
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  18. Systems approaches to Coronavirus pathogenesis.Current opinion in virology · 2014
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 4 countries.

Ali DaneshDivision of Experimental Therapeutics, Toronto General Research Institute, University Health Network, 101 College Street, Toronto, Ontario, Canada.
Cheryl M Cameron
Alberto J León
Longsi Ran
Luoling Xu
Yuan Fang
Alyson A Kelvin
Thomas Rowe
Honglin Chen
Yi Guan
Colleen B Jonsson
Mark J Cameron
David J Kelvin
University Health Network · CAShantou University · CNPredictive Science (United States) · USSardegna Ricerche (Italy) · IT

Funding

MACROPHAGE DEFENSES AGAINST HAEMOPHILUS INFLUENZAER29AI030063 · NIAID · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI NOEL, GARY J. · 1990 to 1994
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CIHR CIHR-200904PAP-203553-PAM-ADHD-48072NIAID NIH HHS N01 AI030063NIAID NIH HHS N01 AI030067NIAID NIH HHS N0I-AI-30063C11NIAID NIH HHS N0I-AI-30067
6 · The paper itself

Abstract

Type I interferons (IFNs) are essential to the clearance of viral diseases, however, a clear distinction between genes upregulated by direct virus-cell interactions and genes upregulated by secondary IFN production has not been made. Here, we investigated differential gene regulation in ferrets upon subcutaneous administration of IFN-α2b and during SARS-CoV infection. In vivo experiments revealed that IFN-α2b causes STAT1 phosphorylation and upregulation of abundant IFN response genes (IRGs), chemokine receptors, and other genes that participate in phagocytosis and leukocyte transendothelial migration. During infection with SARS-CoV not only a variety of IRGs were upregulated, but also a significantly broader range of genes involved in cell migration and inflammation. This work allowed dissection of several molecular signatures present during SARS-CoV which are part of a robust IFN antiviral response. These signatures can be useful markers to evaluate the status of IFN responses during a viral infection and specific features of different viruses.

Indexed as

Disease Models, AnimalGene Expression RegulationAnimalsFerretsGene Expression ProfilingHumansInterferon-alphaInterferon alpha-2MaleMolecular Sequence DataProteinsRecombinant ProteinsSequence Analysis, DNASevere Acute Respiratory SyndromeSevere acute respiratory syndrome-related coronavirusSTAT1 Transcription FactorInterferon-alphaInterferon alpha-2ProteinsRecombinant ProteinsSTAT1 Transcription Factor

Identifiers

PMID21035159
PMCPMC7111932
OpenAlexW1978317159

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.