Evidence map›Paper›PMID 21031560›Full record

ArticleThe Journal of comparative neurology2010

Alternative splicing of neuroligin and its protein distribution in the outer plexiform layer of the chicken retina.

Karl J Wahlin, Laszlo Hackler, Ruben Adler, Donald J Zack

Abstract read
In one paragraph

Article in The Journal of comparative neurology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
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  5. Temporal and Isoform-Specific Expression ofFrontiers in molecular neuroscience · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Karl J WahlinDepartment of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, Maryland 21287, USA. kwahlin1@jhmi.edu
Laszlo Hackler
Ruben Adler
Donald J Zack
Johns Hopkins Medicine · USJohns Hopkins University · US

Funding

Wilmer Core Grant for Vision ResearchP30EY001765 · NEI · JOHNS HOPKINS UNIVERSITY · PI Jiang Qian · 1985 to 2026
$22.1M
REGULATION OF RHODOPSIN GENE EXPRESSIONR01EY009769 · NEI · JOHNS HOPKINS UNIVERSITY · PI ZACK, DONALD J. · 1992 to 2014
$8.1M
VISUAL NEURONS: DEVELOPMENT AND REGENERATION IN VITROR01EY004859 · NEI · JOHNS HOPKINS UNIVERSITY · PI CANTO-SOLER, MARIA VALERIA · 1985 to 2010
$6.2M
NEI NIH HHS EY009769NEI NIH HHS EY04859NEI NIH HHS EY1765NEI NIH HHS P30 EY001765NEI NIH HHS R01 EY004859NEI NIH HHS R01 EY009769PHS HHS T32-07143
6 · The paper itself

Abstract

Although synaptogenesis within the retina is obviously essential for vision, mechanisms responsible for the initiation and maintenance of retinal synapses are poorly understood. In addition to its scientific interest, understanding retinal synapse formation is becoming clinically relevant with ongoing efforts to develop transplantation-based approaches for the treatment of retinal degenerative disease. To extend our understanding, we have focused on the chick model system and have studied the neuroligin family of neuronal adhesion factors that has been shown to participate in synapse assembly in the brain. We identified chicken orthologs of neuroligins 1, -3, and -4, but could find no evidence of neuroligin 2. We investigated temporal and spatial patterns of mRNA and protein expression during development using standard polymerase chain reaction (RT-PCR), quantitative PCR (QPCR), laser-capture microdissection (LCM), and confocal microscopy. At the mRNA level, neuroligins were detected at the earliest period tested, embryonic day (ED)5, which precedes the period of inner retina synaptogenesis. Significant alternative splicing was observed through development. While neuroligin gene products were generally detected in the inner retina, low levels of neuroligin 1 mRNA were also detected in the photoreceptor layer. Neuroligin 3 and -4 transcripts, on the other hand, were only detected in the inner retina. At retinal synapses neuroligin 1 protein was detected in the inner plexiform layer, but its highest levels were detected in the outer plexiform layer on the tips of horizontal cell dendrites. This work lays the groundwork for future studies on the functional roles of the neuroligins within the retina.

Indexed as

Alternative SplicingAnimalsAvian ProteinsCell Adhesion Molecules, NeuronalCell DifferentiationChick EmbryoChickensDendritesEye ProteinsGene Expression Regulation, DevelopmentalMembrane GlycoproteinsMembrane ProteinsNerve Tissue ProteinsNeuronsProtein IsoformsRetinaAvian ProteinsCell Adhesion Molecules, NeuronalEye ProteinsMembrane GlycoproteinsMembrane ProteinsNerve Tissue Proteinsneuroligin 1neuroligin 3Protein Isoforms

Identifiers

PMID21031560
PMCPMC4065168
OpenAlexW2151492633

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.