Evidence map›Paper›PMID 20981710›Full record

ArticleProtein science : a publication of the Protein Society2011

The group II chaperonin Mm-Cpn binds and refolds human γD crystallin.

Kelly M Knee, Daniel R Goulet, Junjie Zhang, Bo Chen, Wah Chiu, Jonathan A King

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Group II archaeal chaperonin recognition of partially folded human γD-crystallin mutants.Protein science : a publication of the Protein Society · 2014
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kelly M KneeDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.
Daniel R Goulet
Junjie Zhang
Bo Chen
Wah Chiu
Jonathan A King
Baylor College of Medicine · USMassachusetts Institute of Technology · US

Funding

Center for Protein Folding Machinery (RMI)PN2EY016525 · NEI · BAYLOR COLLEGE OF MEDICINE · PI CHIU, WAH · 2005 to 2015
$33.6M
Folding &Misfolding of Parallel Beta-Helix ProteinsR01GM017980 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KING, JONATHAN ALAN · 1985 to 2009
$4.9M
Human gammaD-Crystallin Folding Misfolding &Fibril FormR01EY015834 · NEI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KING, JONATHAN ALAN · 2005 to 2014
$3.5M
Center for Protein Folding Machinery (RMI)PN1EY016525 · NEI · BAYLOR COLLEGE OF MEDICINE · PI CHIU, WAH · 2004 to 2004
$67k
BACTERIOPHAGE ASSEMBLY AND ITS GENETIC CONTROLR37GM017980 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KING, JONATHAN A · 1988 to 1997
–
NEI NIH HHS EY015834NEI NIH HHS EY016525-05NEI NIH HHS R01 EY015834NIGMS NIH HHS GM17980NIGMS NIH HHS R01 GM017980
6 · The paper itself

Abstract

Chaperonins assist in the folding of nascent and misfolded proteins, though the mechanism of folding within the lumen of the chaperonin remains poorly understood. The archeal chaperonin from Methanococcus marapaludis, Mm-Cpn, shares the eightfold double barrel structure with other group II chaperonins, including the eukaryotic TRiC/CCT, required for actin and tubulin folding. However, Mm-Cpn is composed of a single species subunit, similar to group I chaperonin GroEL, rather than the eight subunit species needed for TRiC/CCT. Features of the β-sheet fold have been identified as sites of recognition by group II chaperonins. The crystallins, the major components of the vertebrate eye lens, are β-sheet proteins with two homologous Greek key domains. During refolding in vitro a partially folded intermediate is populated, and partitions between productive folding and off-pathway aggregation. We report here that in the presence of physiological concentrations of ATP, Mm-Cpn suppressed the aggregation of HγD-Crys by binding the partially folded intermediate. The complex was sufficiently stable to permit recovery by size exclusion chromatography. In the presence of ATP, Mm-Cpn promoted the refolding of the HγD-Crys intermediates to the native state. The ability of Mm-Cpn to bind and refold a human β-sheet protein suggests that Mm-Cpn may be useful as a simplified model for the substrate recognition mechanism of TRiC/CCT.

Indexed as

MethanococcusAdenosine TriphosphateBacterial Proteinsgamma-CrystallinsGroup II ChaperoninsHumansProtein BindingProtein RefoldingAdenosine TriphosphateBacterial ProteinsCRYGD protein, humangamma-CrystallinsGroup II Chaperonins

Identifiers

PMID20981710
PMCPMC3047059
OpenAlexW2138396517

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.