Evidence map›Paper›PMID 20980825›Full record

ArticleCell cycle (Georgetown, Tex.)2010

Redundancy and variation in the ubiquitin-mediated proteolytic targeting of a transcription factor.

Eric M Rubenstein, Mark Hochstrasser

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Praja1 RING-finger E3 ubiquitin ligase is a common suppressor of neurodegenerative disease-associated protein aggregation.Neuropathology : official journal of the Japanese Society of Neuropathology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Eric M RubensteinDepartment of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA.
Mark Hochstrasser
University of New Haven · US

Funding

FUNCTIONS AND MECHANISMS OF DEUBIQUITINATING ENZYMESR01GM053756 · NIGMS · YALE UNIVERSITY · PI HOCHSTRASSER, MARK W · 1996 to 2019
$6.5M
Degradation of Short Lived Regulatory Protein in YeastR37GM046904 · NIGMS · YALE UNIVERSITY · PI HOCHSTRASSER, MARK W · 2009 to 2018
$3.6M
DEGRADTION OF SHORT-LIVED REGULATORY PROTEINS IN YEASTR01GM046904 · NIGMS · YALE UNIVERSITY · PI HOCHSTRASSER, MARK W · 1992 to 2020
$3.6M
Nuclear Localization and Function of the Transmembrane Doa10 Ubiquitin LigaseF32GM088995 · NIGMS · YALE UNIVERSITY · PI RUBENSTEIN, ERIC MEYER · 2009 to 2011
$151k
NIGMS NIH HHS F32 GM088995NIGMS NIH HHS GM046904NIGMS NIH HHS GM053756NIGMS NIH HHS R01 GM046904NIGMS NIH HHS R01 GM053756NIGMS NIH HHS R37 GM046904
6 · The paper itself

Abstract

As central components of the intricate networks of eukaryotic gene regulation, transcription factors are frequent targets of ubiquitin-dependent proteolysis. A well-known example is the budding yeast MATα2 (α2) transcriptional repressor, which functions as a master regulator of cell-type determination. Degradation of α2 by the ubiquitin-proteasome system is necessary for a phenotypic switch from one cell type to another. A surprisingly complex set of ubiquitin-protein conjugation mechanisms are involved. One pathway utilizes an integral-membrane ubiquitin ligase (E3) that also functions in endoplasmic reticulum-associated degradation (ERAD). Recently, we showed that a second α2 ubiquitylation pathway uses a heterodimeric E3 that, while able to bind the ubiquitin-like protein SUMO, directly recognizes non-sumoylated α2. Other transcription factors are now also known to be ubiquitylated by multiple mechanisms; as many as a dozen E3s have been implicated in degradation of the human p53 tumor suppressor, for example. We discuss general issues of redundancy and mechanistic variation in protein modification by ubiquitin.

Indexed as

Endoplasmic ReticulumHumansProteasome Endopeptidase ComplexRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSUMO-1 ProteinTumor Suppressor Protein p53UbiquitinUbiquitinationUbiquitin-Protein LigasesMATA2 protein, S cerevisiaeProteasome Endopeptidase ComplexRepressor ProteinsSaccharomyces cerevisiae ProteinsSUMO-1 ProteinTumor Suppressor Protein p53UbiquitinUbiquitin-Protein Ligases

Identifiers

PMID20980825
PMCPMC3055181
OpenAlexW1981214985

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.