Evidence map›Paper›PMID 20980574›Full record

ArticleJournal of clinical microbiology2011

Analyses of pediatric isolates of Cryptococcus neoformans from South Africa.

Kathleen J Miglia, Nelesh P Govender, Jenny Rossouw, Susan Meiring, Thomas G Mitchell, Group for Enteric, Respiratory and Meningeal Disease Surveillance in South Africa

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 42 citations in OpenAlex.

  1. Pooled it
  2. Neurological Sequelae After Paediatric Cryptococcal Meningitis.Journal of fungi (Basel, Switzerland) · 2025
    Review
  3. Genotyping Analysis ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  4. Journal of fungi (Basel, Switzerland) · 2022
    Review
  5. Review
  6. Article
  7. Associations betweenJournal of fungi (Basel, Switzerland) · 2021
    Review
  8. Review
  9. Article
  10. Observational
  11. Article
  12. Article
  13. Article
  14. Cryptococcal Disease in HIV-Infected Children.Current infectious disease reports · 2016
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Cryptococcosis in Colombian children and literature review.Memorias do Instituto Oswaldo Cruz · 2014
    Observational
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Kathleen J MigliaDepartment of Molecular Genetics and Microbiology, 207 Research Drive, Duke University Medical Center, Durham, NC 27710, USA.
Nelesh P Govender
Jenny Rossouw
Susan Meiring
Thomas G Mitchell
Group for Enteric, Respiratory and Meningeal Disease Surveillance in South Africa
National Health Laboratory Service · ZADuke University · USDuke University Hospital · US

Funding

STUDIES OF CRYPTOCOCCUS NEOFORMANTS ASSOCIATED WITH AIDSR01AI025783 · NIAID · DUKE UNIVERSITY · PI MITCHELL, THOMAS G. · 1987 to 2010
$2.1M
NIAID NIH HHS R01 AI 025783NIAID NIH HHS R01 AI025783PHS HHS U60/CCU022088PHS HHS U62/PSO022901
6 · The paper itself

Abstract

Compared to the incidence in adults, cryptococcosis is inexplicably rare among children, even in sub-Saharan Africa, which has the highest prevalence of coinfection with HIV and Cryptococcus neoformans. To explore any mycological basis for this age-related difference in the incidence of cryptococcosis, we investigated isolates of C. neoformans recovered from pediatric and adult patients during a 2-year period in South Africa. From reports to the Group for Enteric, Respiratory, and Meningeal Disease Surveillance in South Africa (GERMS-SA), we reviewed all cases of cryptococcosis in 2005 and 2006. We analyzed one isolate of C. neoformans from each of 82 pediatric patients (<15 years of age) and determined the multilocus sequence type (ST), mating type, ploidy, and allelic profile. This sample included isolates of all three molecular types of serotype A or C. neoformans var. grubii (molecular types VNI, VNII, and VNB) and one AD hybrid. Seventy-seven (94%) of the strains possessed the MATα mating type allele, and five were MATa. Seventy-five (91%) were haploid, and seven were diploid. A total of 24 different STs were identified. The ratios of each mating type and the proportion of haploids were comparable to those for the isolates that were obtained from 86 adult patients during the same period. Notably, the most prevalent pediatric ST was significantly associated with male patients. Overall, these pediatric isolates exhibited high genotypic diversity. They included a relatively large percentage of diploids and the rarely reported MATa mating type.

Indexed as

Genetic VariationAdolescentAdultAllelesChildChild, PreschoolCryptococcosisCryptococcus neoformansDNA, FungalFemaleGenes, Mating Type, FungalGenotypeHumansInfantInfant, NewbornMaleDNA, Fungal

Identifiers

PMID20980574
PMCPMC3020432
OpenAlexW1969451874

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.