Evidence map›Paper›PMID 20980406›Full record

ArticleAmerican journal of physiology. Renal physiology2011

Glyceraldehyde 3-phosphate dehydrogenase is required for band 3 (anion exchanger 1) membrane residency in the mammalian kidney.

Ya Su, Katherine G Blake-Palmer, Andrew C Fry, Alison Best, Alice C N Brown, Thomas F Hiemstra, Shoko Horita, Aiwu Zhou, Ashley M Toye, Fiona E Karet

Abstract read
In one paragraph

Article in American journal of physiology. Renal physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 33 citations in OpenAlex.

  1. eLife · 2026
    Article
  2. Potential Theranostic Roles of SLC4 Molecules in Human Diseases.International journal of molecular sciences · 2023
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Physical and functional links between anion exchanger-1 and sodium pump.Journal of the American Society of Nephrology : JASN · 2015
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Ya SuDepartment of Medical Genetics, University of Cambridge, and Cambridge Institute for Medical Research, Addenbrooke's Hospital, Box 139, Hills Rd., Cambridge CB2 0XY, UK.
Katherine G Blake-Palmer
Andrew C Fry
Alison Best
Alice C N Brown
Thomas F Hiemstra
Shoko Horita
Aiwu Zhou
Ashley M Toye
Fiona E Karet
Medical Genetics Center · DEUniversity of Bristol · GBUniversity of Cambridge · GB

Funding

British Heart FoundationWellcome Trust 079895
6 · The paper itself

Abstract

The mammalian kidney isoform of the essential chloride-bicarbonate exchanger AE1 differs from its erythrocyte counterpart, being shorter at its N terminus. It has previously been reported that the glycolytic enzyme GAPDH interacts only with erythrocyte AE1, by binding to the portion not found in the kidney isoform. (Chu H, Low PS. Biochem J 400:143-151, 2006). We have identified GAPDH as a candidate binding partner for the C terminus of both AE1 and AE2. We show that full-length AE1 and GAPDH coimmunoprecipitated from both human and rat kidney as well as from Madin-Darby canine kidney (MDCK) cells stably expressing kidney AE1, while in human liver, AE2 coprecipitated with GAPDH. ELISA and glutathione S-transferase (GST) pull-down assays using GST-tagged C-terminal AE1 fusion protein confirmed that the interaction is direct; fluorescence titration revealed saturable binding kinetics with Kd 2.3±0.2 μM. Further GST precipitation assays demonstrated that the D902EY residues in the D902EYDE motif located within the C terminus of AE1 are important for GAPDH binding. In vitro GAPDH activity was unaffected by C-terminal AE1 binding, unlike in erythrocytes. Also, differently from red cell N-terminal binding, GAPDH-AE1 C-terminal binding was not disrupted by phosphorylation of AE1 in kidney AE1-expressing MDCK cells. Importantly, small interfering RNA knockdown of GAPDH in these cells resulted in significant intracellular retention of AE1, with a concomitant reduction in AE1 at the cell membrane. These results indicate differences between kidney and erythrocyte AE1/GAPDH behavior and show that in the kidney, GAPDH is required for kidney AE1 to achieve stable basolateral residency.

Indexed as

Amino Acid SequenceAnimalsAnion Exchange Protein 1, ErythrocyteAnion Transport ProteinsAntiportersGlutathione TransferaseGlyceraldehyde-3-Phosphate DehydrogenasesHumansKidneyMolecular Sequence DataRatsSLC4A ProteinsAnion Exchange Protein 1, ErythrocyteAnion Transport ProteinsAntiportersGlutathione TransferaseGlyceraldehyde-3-Phosphate DehydrogenasesSLC4A Proteins

Identifiers

PMID20980406
PMCPMC3023227
OpenAlexW2099248086

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.