Evidence map›Paper›PMID 20980262›Full record

ArticleThe Journal of biological chemistry2011

Single domain intracellular antibodies from diverse libraries: emphasizing dual functions of LMO2 protein interactions using a single VH domain.

Tomoyuki Tanaka, Helen Sewell, Simon Waters, Simon E V Phillips, Terence H Rabbitts

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 42 citations in OpenAlex.

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  13. Advances in targeted degradation of endogenous proteins.Cellular and molecular life sciences : CMLS · 2019
    Review
  14. Article
  15. Article
  16. Single domain antibodies for the knockdown of cytosolic and nuclear proteins.Protein science : a publication of the Protein Society · 2017
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Tomoyuki TanakaLeeds Institute of Molecular Medicine, St. James's University Hospital, University of Leeds, Leeds LS9 7TF, United Kingdom.
Helen Sewell
Simon Waters
Simon E V Phillips
Terence H Rabbitts
University of Leeds · GBRutherford Appleton Laboratory · GBSt James's University Hospital · GB

Funding

Medical Research Council G0600914Medical Research Council G0901686
6 · The paper itself

Abstract

Interfering intracellular antibodies are valuable for biological studies as drug surrogates and as potential macromolecular drugs per se. Their application is still limited because of the difficulty of acquisition of functional intracellular antibodies. We describe the use of the new intracellular antibody capture procedure (IAC(3)) to facilitate direct isolation of functional single domain antibody fragments using four independent target molecules (LMO2, TP53, CRAF1, and Hoxa9) from a set of diverse libraries. Initially, these have variability in only one of the three antigen-binding CDR regions of VH or VL and first round single domains are affinity matured by iterative randomization of the two other CDRs and reselection. We highlight the approach using a single domain binding to LMO2 protein. Our results show that interfering with LMO2 protein function demonstrates a role specifically in erythroid differentiation, confirm a necessary and sufficient function for LMO2 as a cancer therapy target in T-cell neoplasia and allowed for the first time production of soluble recombinant LMO2 protein by co-expression with intracellular domain antibodies. Co-crystallization of LMO2 and the anti-LMO2 VH protein was successful. These results demonstrate that this third generation IAC(3) offers a robust toolbox for various biomedical applications and consolidates functional features of the LMO2 protein complex, which includes the importance of Lmo2-Ldb1 protein interaction.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsAntibodiesAntineoplastic AgentsCell DifferentiationDNA-Binding ProteinsErythroid CellsImmunoglobulin Heavy ChainsImmunoglobulin Variable RegionLIM Domain ProteinsMetalloproteinsMicePeptide LibraryProtein BindingAdaptor Proteins, Signal TransducingAntibodiesAntineoplastic AgentsDNA-Binding ProteinsImmunoglobulin Heavy ChainsImmunoglobulin Variable RegionLdb1 protein, mouseLIM Domain ProteinsLmo2 protein, mouseMetalloproteinsPeptide Library

Identifiers

PMID20980262
PMCPMC3030373
OpenAlexW1976479741

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.