Evidence map›Paper›PMID 20978146›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2010

von Hippel-Lindau-dependent patterns of RNA polymerase II hydroxylation in human renal clear cell carcinomas.

Ying Yi, Olga Mikhaylova, Aygun Mamedova, Prabhat Bastola, Jacek Biesiada, Enas Alshaikh, Linda Levin, Rachel M Sheridan, Jarek Meller, Maria F Czyzyk-Krzeska

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
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  3. Article
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  5. Review
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  8. Interaction with p53 explains a pro-proliferative function for VHL in cancer.Journal of molecular medicine (Berlin, Germany) · 2020
    Article
  9. Article
  10. The PHD1 oxygen sensor in health and disease.The Journal of physiology · 2018
    Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Polymorphism in PHD1 gene and risk of non-small cell lung cancer in a Chinese population.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Article
  16. Article
  17. The role of HIF1α in renal cell carcinoma tumorigenesis.Journal of molecular medicine (Berlin, Germany) · 2014
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Ying YiDepartment of Cancer and Cell Biology, University of Cincinnati College of Medicine, Cincinnati, Ohio 45267-0521, USA.
Olga Mikhaylova
Aygun Mamedova
Prabhat Bastola
Jacek Biesiada
Enas Alshaikh
Linda Levin
Rachel M Sheridan
Jarek Meller
Maria F Czyzyk-Krzeska
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati · US

Funding

REPRODUCTIVE AND DEVELOPMENTAL TOXICOLOGY RESEARCHP30ES006096 · NIEHS · UNIVERSITY OF CINCINNATI · PI YADAV, JAGJIT S · 1992 to 2022
$35.4M
Role of ubiquitylation in renal cancerR01CA122346 · NCI · UNIVERSITY OF CINCINNATI · PI CZYZYK-KRZESKA, MARIA F · 2007 to 2017
$3.0M
BLRD VA I01 BX001110NCI NIH HHS CA122346NCI NIH HHS R01 CA122346NIEHS NIH HHS P30 ES006096NIEHS NIH HHS P30-ES006096
6 · The paper itself

Abstract

purposeWe have previously shown that von Hippel-Lindau (VHL) regulates ubiquitylation and proline 1465 hydroxylation of the large subunit of RNA polymerase II, Rpb1, in human renal clear cell carcinoma (RCC) cell lines. Here, our goal was to determine the effect of this VHL function and the status of P1465 hydroxylation in human RCC tumors. EXPERIMENTAL

designPrimary human tumors and matched normal kidney samples were probed for expression levels of the large subunit of RNA polymerase II (Rpb1), Rpb1 hydroxylated on P1465 [Rpb1(OH)], Rpb1 phosphorylated on Ser5 [Rpb1(S5P)], and proline hydroxylases PHD1, PHD2, and PHD3. Results from RCC tumors were categorized according to the status of VHL gene. Mechanistic analysis was performed in orthotopic xenograft model using 786-O RCC cells with wild-type (WT) VHL and knockdown of PHD2, characterized by high levels of Rpb1(OH) and PHD1.

resultsLevels of Rpb1(OH), PHD1, and PHD2 were significantly higher in RCC tumors compared with normal kidneys. RCC tumors with WT VHL had higher levels of Rpb1(OH) and PHD1 and lower levels of PHD2 than tumors with VHL gene alterations. Levels of Rpb1(OH) significantly correlated with levels of PHD1 in tumors and normal kidneys. Knockdown of PHD2 in 786-O VHL(+) cells resulted in a more malignant phenotype in orthotopic xenografts and higher expression of specific cell cycle regulators (CDC25A, cyclin-dependent kinase 2, CCNA2) compared with VHL(-) RCC cells.

conclusionsElevated PHD1 concomitant with decreased PHD2 are causatively related to Rpb1 hydroxylation and oncogenesis in human RCC tumors with WT VHL gene. Thus, P1465-hydroxylated Rpb1 and PHD1 represent attractive drug targets for new RCC treatments.

Indexed as

AnimalsCarcinoma, Renal CellCase-Control StudiesCell Line, TumorDioxygenasesGene Expression Regulation, EnzymologicGene Expression Regulation, NeoplasticHumansHydroxylationHypoxia-Inducible Factor-Proline DioxygenasesKidney NeoplasmsMiceMice, NudeModels, BiologicalNuclear ProteinsProcollagen-Proline DioxygenaseDioxygenasesEGLN1 protein, humanEGLN2 protein, humanHypoxia-Inducible Factor-Proline DioxygenasesNuclear ProteinsProcollagen-Proline DioxygenaseRNA Polymerase IIVon Hippel-Lindau Tumor Suppressor Protein

Identifiers

PMID20978146
PMCPMC2970636
OpenAlexW2040855644

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.