Evidence map›Paper›PMID 20975932›Full record

ArticlePLoS computational biology2010

Non-centered spike-triggered covariance analysis reveals neurotrophin-3 as a developmental regulator of receptive field properties of ON-OFF retinal ganglion cells.

Donald R Cantrell, Jianhua Cang, John B Troy, Xiaorong Liu

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 44 citations in OpenAlex.

  1. Receptive Field Sizes ofInternational journal of molecular sciences · 2022
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  8. The dynamic receptive fields of retinal ganglion cells.Progress in retinal and eye research · 2018
    Review
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  15. Increasing Spontaneous Retinal Activity before Eye Opening Accelerates the Development of Geniculate Receptive Fields.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2015
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Donald R CantrellInterdepartmental Neuroscience Program, Northwestern University, Evanston, Illinois, USA.
Jianhua Cang
John B Troy
Xiaorong Liu
Northwestern University · US

Funding

Topographic Maps and Visual Cortical FunctionsR01EY018621 · NEI · NORTHWESTERN UNIVERSITY · PI CANG, JIANHUA · 2008 to 2011
$1.5M
Neurotrophic Mechanisms in Retinal Ganglion Cell MaturationR01EY019034 · NEI · NORTHWESTERN UNIVERSITY · PI LIU, XIAORONG · 2008 to 2011
$1.4M
A nanoelectrode for neurophysiology &neuroprostheticsR21EB004200 · NIBIB · NORTHWESTERN UNIVERSITY · PI TROY, JOHN B · 2004 to 2005
$285k
Multidisciplinary Clinical and Translational Science (MCTS) Program (TL1)TL1RR025739 · NCRR · NORTHWESTERN UNIVERSITY AT CHICAGO · PI GREENLAND, PHILIP · 2008 to 2011
$228k
NCRR NIH HHS TL1 RR025739NCRR NIH HHS TL1RR025739-01NEI NIH HHS R01 EY018621NEI NIH HHS R01EY018621NEI NIH HHS R01 EY019034NEI NIH HHS R01EY019034NIBIB NIH HHS R21 EB004200NIBIB NIH HHS R21EB004200
6 · The paper itself

Abstract

The functional separation of ON and OFF pathways, one of the fundamental features of the visual system, starts in the retina. During postnatal development, some retinal ganglion cells (RGCs) whose dendrites arborize in both ON and OFF sublaminae of the inner plexiform layer transform into RGCs with dendrites that monostratify in either the ON or OFF sublamina, acquiring final dendritic morphology in a subtype-dependent manner. Little is known about how the receptive field (RF) properties of ON, OFF, and ON-OFF RGCs mature during this time because of the lack of a reliable and efficient method to classify RGCs into these subtypes. To address this deficiency, we developed an innovative variant of Spike Triggered Covariance (STC) analysis, which we term Spike Triggered Covariance - Non-Centered (STC-NC) analysis. Using a multi-electrode array (MEA), we recorded the responses of a large population of mouse RGCs to a Gaussian white noise stimulus. As expected, the Spike-Triggered Average (STA) fails to identify responses driven by symmetric static nonlinearities such as those that underlie ON-OFF center RGC behavior. The STC-NC technique, in contrast, provides an efficient means to identify ON-OFF responses and quantify their RF center sizes accurately. Using this new tool, we find that RGCs gradually develop sensitivity to focal stimulation after eye opening, that the percentage of ON-OFF center cells decreases with age, and that RF centers of ON and ON-OFF cells become smaller. Importantly, we demonstrate for the first time that neurotrophin-3 (NT-3) regulates the development of physiological properties of ON-OFF center RGCs. Overexpression of NT-3 leads to the precocious maturation of RGC responsiveness and accelerates the developmental decrease of RF center size in ON-OFF cells. In summary, our study introduces STC-NC analysis which successfully identifies subtype RGCs and demonstrates how RF development relates to a neurotrophic driver in the retina.

Indexed as

Action PotentialsAnalysis of VarianceAnimalsMiceMice, Inbred C57BLMice, TransgenicNerve Growth FactorsPhotic StimulationPrincipal Component AnalysisRetinaRetinal Ganglion CellsSignal TransductionStatistics, NonparametricVisual FieldsNerve Growth Factorsneurotropin 3, mouse

Identifiers

PMID20975932
PMCPMC2958799
OpenAlexW2074041755

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.