Evidence map›Paper›PMID 20974210›Full record

ArticleExperimental hematology2011

siDNMT1 increases γ-globin expression in chemical inducer of dimerization (CID)-dependent mouse βYAC bone marrow cells and in baboon erythroid progenitor cell cultures.

Virryan Banzon, Vinzon Ibanez, Kestis Vaitkus, Maria Armila Ruiz, Kenneth Peterson, Joseph DeSimone, Donald Lavelle

Open access · greenAbstract read
In one paragraph

Article in Experimental hematology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Review
  3. Exploring epigenetic and microRNA approaches for γ-globin gene regulation.Experimental biology and medicine (Maywood, N.J.) · 2021
    Review
  4. Article
  5. Review
  6. Article
  7. Epigenetic regulation of fetal globin gene expression in adult erythroid cells.Translational research : the journal of laboratory and clinical medicine · 2015
    Review
  8. Review
  9. Article
  10. Article
  11. The switch from fetal to adult hemoglobin.Cold Spring Harbor perspectives in medicine · 2013
    Article
  12. Generation of a genomic reporter assay system for analysis of γ- and β-globin gene regulation.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2012
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Virryan BanzonDepartment of Medicine, University of Illinois at Chicago, Chicago, IL, USA.
Vinzon Ibanez
Kestis Vaitkus
Maria Armila Ruiz
Kenneth Peterson
Joseph DeSimone
Donald Lavelle
Jesse Brown VA Medical Center · USUniversity of Illinois Chicago · USUniversity of Kansas · US

Funding

Tailored education for informed preproductive decisions in sickle cell diseaseU54HL090513 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DESIMONE, JOSEPH · 2008 to 2011
$4.5M
NHLBI NIH HHS U54 HL090513
6 · The paper itself

Abstract

objectiveThese studies were performed to test the hypothesis that DNMT1 is required for maintenance of DNA methylation and repression of the γ-globin gene in adult-stage erythroid cells. MATERIALS AND

methodsDNMT1 levels were reduced by nucleofection of small interfering RNA targeting DNMT1 in chemical inducer of dimerization-dependent multipotential mouse bone marrow cells containing the human β-globin gene locus in the context of a yeast artificial chromosome and in primary cultures of erythroid progenitor cells derived from CD34(+) baboon bone marrow cells. The effect of reduced DNMT1 levels on globin gene expression was measured by real-time polymerase chain reaction and the effect on globin chain synthesis in primary erythroid progenitor cell cultures was determined by biosynthetic radiolabeling of globin chains followed by high-performance liquid chromatography analysis. The effect on DNA methylation was determined by bisulfite sequence analysis.

resultsReduced DNMT1 levels in cells treated with siDNMT1 were associated with increased expression of γ-globin messenger RNA, an increased γ/γ+β chain ratio in cultured erythroid progenitors, and decreased DNA methylation of the γ-globin promoter. Similar effects were observed in cells treated with decitabine, a pharmacological inhibitor of DNA methyltransferase inhibitor.

conclusionsDNMT1 is required to maintain DNA methylation of the γ-globin gene promoter and repress γ-globin gene expression in adult-stage erythroid cells.

Indexed as

AnimalsAntigens, CD34Blotting, WesternBone Marrow CellsCells, CulturedChromosomes, Artificial, YeastDimerizationDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA MethylationErythroid Precursor Cellsgamma-GlobinsHumansMicePapioRNA, Small InterferingAntigens, CD34DNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNMT1 protein, humanDnmt1 protein, mousegamma-GlobinsRNA, Small Interfering

Identifiers

PMID20974210
PMCPMC4392400
OpenAlexW2081543205

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.