Evidence map›Paper›PMID 20972560›Full record

ArticleJournal of molecular evolution2010

A tandem duplication of manganese superoxide dismutase in Nosema bombycis and its evolutionary origins.

Heng Xiang, Guoqing Pan, Charles R Vossbrinck, Ruizhi Zhang, Jinshan Xu, Tian Li, Zeyang Zhou, Cheng Lu, Zhonghuai Xiang

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Article in Journal of molecular evolution, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Heng XiangInstitute of Sericulture and Systems Biology, Southwest University, Beibei District, Chongqing, 400715, China.
Guoqing Pan
Charles R Vossbrinck
Ruizhi Zhang
Jinshan Xu
Tian Li
Zeyang Zhou
Cheng Lu
Zhonghuai Xiang
Southwest University · CNChongqing Normal University · CNConnecticut Agricultural Experiment Station · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microsporidia are a group of obligate intracellular eukaryotic parasites with small genomes. They infect animals from a wide variety of phyla, including humans. Two manganese superoxide dismutase (MnSOD) genes, designated NbMnSOD1 and NbMnSOD2, were found to be organized in a tandem array within the Nosema bombycis genome. The genes, both 678 bp in length, were found to be more similar to each other than they are to homologous genes of other Microsporidia, suggesting that the tandem duplication occurred subsequent to the development of this lineage. Reverse transcript PCR shows that mRNA for both genes is present in the spores. Analysis of the primary structure, hydrophobic cluster analysis, target signal analysis, and phylogenetic analysis all indicate that NbMnSOD1 is dimeric and targeted to the cytosol. NbMnSOD2 seems to have changed more rapidly and is under less evolutionary constraint than NbMnSOD1 suggesting that NbMnSOD2 may function under different conditions or in different tissues of its host rather than simply resulting in an increase in expression. A phylogenetic analysis of MnSOD sequences from eukaryotes, Archaea, and bacteria shows the microsporidial MnSODs to be grouped with the bacteria suggesting a possible horizontal gene transfer.

Indexed as

Evolution, MolecularAmino Acid SequenceAmino Acid SubstitutionCluster AnalysisGene DuplicationGene Expression Regulation, EnzymologicGene Expression Regulation, FungalGenome, FungalHydrophobic and Hydrophilic InteractionsMolecular Sequence DataNosemaPhylogenyProtein TransportSelection, GeneticSequence AlignmentSequence Homology, Amino AcidSuperoxide Dismutase

Identifiers

PMID20972560
OpenAlexW1979694014

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.