ArticleNucleic acids research2011
VKCDB: voltage-gated K+ channel database updated and upgraded.
Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
11 citing papers in PubMed.
- DICL: a manually curated database of ion channels and ligands as a useful platform for drug discovery targeting ion channels.Journal of cheminformatics · 2026Article
- Isaacs' syndrome: Clinical and paraclinical perspectives in a series of cases.Current journal of neurology · 2024Article
- Case report: Recurring potassium channel complex autoimmunity-related neuropathic pain.Frontiers in immunology · 2024Article
- Homologous Cloning of Potassium Channel Genes From the Superior Apple Rootstock Line 12-2, Which is Tolerant to Apple Replant Disease.Frontiers in genetics · 2022Article
- ChannelsDB: database of biomacromolecular tunnels and pores.Nucleic acids research · 2018Article
- Pipeline for the identification and classification of ion channels in parasitic flatworms.Parasites & vectors · 2016Article
- Article
- Briefing in application of machine learning methods in ion channel prediction.TheScientificWorldJournal · 2015Review
- Identifying the subfamilies of voltage-gated potassium channels using feature selection technique.International journal of molecular sciences · 2014Article
- SuperPain--a resource on pain-relieving compounds targeting ion channels.Nucleic acids research · 2014Article
- HMPAS: Human Membrane Protein Analysis System.Proteome science · 2013Article
Corrections and comments
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Authors and funding
2 authors.
Funding
Abstract
The Voltage-gated K(+) Channel DataBase (VKCDB) (http://vkcdb.biology.ualberta.ca) makes a comprehensive set of sequence data readily available for phylogenetic and comparative analysis. The current update contains 2063 entries for full-length or nearly full-length unique channel sequences from Bacteria (477), Archaea (18) and Eukaryotes (1568), an increase from 346 solely eukaryotic entries in the original release. In addition to protein sequences for channels, corresponding nucleotide sequences of the open reading frames corresponding to the amino acid sequences are now available and can be extracted in parallel with sets of protein sequences. Channels are categorized into subfamilies by phylogenetic analysis and by using hidden Markov model analyses. Although the raw database contains a number of fragmentary, duplicated, obsolete and non-channel sequences that were collected in early steps of data collection, the web interface will only return entries that have been validated as likely K(+) channels. The retrieval function of the web interface allows retrieval of entries that contain a substantial fraction of the core structural elements of VKCs, fragmentary entries, or both. The full database can be downloaded as either a MySQL dump or as an XML dump from the web site. We have now implemented automated updates at quarterly intervals.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.