Evidence map›Paper›PMID 20971900›Full record

ArticleJournal of bacteriology2011

Regulation and function of Escherichia coli sugar efflux transporter A (SetA) during glucose-phosphate stress.

Yan Sun, Carin K Vanderpool

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 40 citations in OpenAlex.

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  14. How do base-pairing small RNAs evolve?FEMS microbiology reviews · 2015
    Review
  15. The small RNA SgrS: roles in metabolism and pathogenesis of enteric bacteria.Frontiers in cellular and infection microbiology · 2014
    Review
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yan SunDepartment of Microbiology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Carin K Vanderpool
University of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accumulation of certain nonmetabolizable sugar-phosphates (including α-methyl glucoside-6-phosphate) in Escherichia coli is growth inhibitory and elicits the glucose-phosphate stress response. The transcription factor SgrR activates transcription of the small RNA SgrS under stress conditions. SgrS represses translation of mRNAs encoding sugar transporters. The sgrR and sgrS genes are located directly upstream of setA, and this gene organization is conserved in numerous enteric species, prompting the hypothesis that SetA contributes to the glucose-phosphate stress response. SetA is a proton motive force-driven efflux pump capable of transporting various sugars and sugar analogs in vitro. This study demonstrates that setA expression is induced in response to glucose-phosphate stress, and this requires SgrR. Under stress conditions, setA is cotranscribed with sgrS from the sgrS promoter. A setA mutant exhibits a growth defect under stress conditions that can be complemented by setA in trans, suggesting that SetA contributes to the optimal cellular recovery from stress. Despite previous in vitro evidence that SetA can promote efflux of the stress-causing glucose analog α-methyl glucoside, in vivo data in this study indicate that SetA is not the major efflux pump responsible for removal of α-methyl glucoside under stress conditions.

Indexed as

Stress, PhysiologicalBase SequenceCyclic AMP Receptor ProteinEscherichia coliEscherichia coli ProteinsFructoseGene Expression Regulation, BacterialGlucoseGlycerolMolecular Sequence DataMonosaccharide Transport ProteinsMutationPhosphatesRepressor ProteinsRNA, MessengerSignal Transductioncrp protein, E coliCyclic AMP Receptor ProteinEscherichia coli ProteinsFructoseGlucoseGlycerolKdgR protein, E coliMonosaccharide Transport ProteinsPhosphatesRepressor ProteinsRNA, MessengersetA protein, E coliSgrR protein, E coliTrans-Activators

Identifiers

PMID20971900
PMCPMC3019967
OpenAlexW2153949128

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.