Evidence map›Paper›PMID 20971879›Full record

ArticleAmerican journal of respiratory cell and molecular biology2011

Identification of the Mhc region as an asthma susceptibility locus in recombinant congenic mice.

Martijn C Nawijn, Benoit J A Piavaux, Prescilla V Jeurink, Renée Gras, Marjan A Reinders, Timothy Stearns, Simon Foote, Machteld N Hylkema, Peter C Groot, Ron Korstanje and 1 more

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Martijn C NawijnLaboratory of Allergology & Pulmonary Diseases, Department of Pathology and Medical Biology, GRIAC Research Institute, University Medical Centre Groningen, University of Groningen, the Netherlands.
Benoit J A Piavaux
Prescilla V Jeurink
Renée Gras
Marjan A Reinders
Timothy Stearns
Simon Foote
Machteld N Hylkema
Peter C Groot
Ron Korstanje
Antoon J M Van Oosterhout
University Medical Center Groningen · NLJackson Laboratory · USUtrecht University · NLMenzies School of Health Research · AU

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
Mapping Gene Mutations That Alter HDL Cholesterol Levels in MiceR01HL095668 · NHLBI · JACKSON LABORATORY · PI KORSTANJE, RONNY · 2009 to 2013
$2.4M
Identifying Kidney Disease Genes Through MutagenesisR01DK069381 · NIDDK · JACKSON LABORATORY · PI KORSTANJE, RONNY · 2005 to 2009
$1.6M
NCI NIH HHS CA034196NHLBI NIH HHS HL095668NHLBI NIH HHS R01 HL095668NIDDK NIH HHS DK069381NIDDK NIH HHS R01 DK069381
6 · The paper itself

Abstract

Mouse models of allergic asthma are characterized by airway hyperreactivity (AHR), Th2-driven eosinophilic airway inflammation, high allergen-specific IgE (anti-OVA IgE) levels in serum, and airway remodeling. Because asthma susceptibility has a strong genetic component, we aimed to identify new asthma susceptibility genes in the mouse by analyzing the asthma phenotypes of the Leishmania major resistant (lmr) recombinant congenic (RC) strains. The lmr RC strains are derived from C57BL/6 and BALB/c intercrosses and carry congenic loci on chromosome 17 (lmr1) and 9 (lmr2) in both backgrounds. Whereas the lmr2 locus on chromosome 9 contributes to a small background-specific effect on anti-OVA IgE and AHR, the lmr1 locus on chromosome 17 mediates a strong effect on Th2-driven eosinophilic airway inflammation and background-specific effects on anti-OVA IgE and AHR. The lmr1 locus contains almost 600 polymorphic genes. To narrow down this number of candidate genes, we performed genome-wide transcriptional profiling on lung tissue from C.lmr1 RC mice and BALB/c control mice. We identified a small number of differentially expressed genes located within the congenic fragment, including a number of Mhc genes, polymorphic between BALB/c and C57Bl/6. The analysis of asthma phenotypes in the C.B10-H2b RC strain, carrying the C57Bl/6 haplotype of the Mhc locus in a BALB/c genetic background, reveals a strikingly similar asthma phenotype compared with C.lmr1, indicating that the differentially expressed genes located within the C.B10-H2b congenic fragment are the most likely candidate genes to contribute to the reduced asthma phenotypes associated with the C57Bl/6 allele of lmr1.

Indexed as

Airway RemodelingAnimalsAsthmaBiomarkersBronchial HyperreactivityBronchoalveolar Lavage FluidChromosome MappingDisease Models, AnimalEosinophiliaEosinophilsFemaleGene Expression ProfilingImmunoglobulin EInflammationLeishmania majorLeishmaniasisBiomarkersImmunoglobulin EOvalbuminRNA, Messenger

Identifiers

PMID20971879
PMCPMC3266060
OpenAlexW2017285083

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.