Evidence map›Paper›PMID 20971490›Full record

ArticleVirology2011

Identification of tolerated insertion sites in poliovirus non-structural proteins.

Natalya L Teterina, Chris Lauber, Kenneth S Jensen, Eric A Levenson, Alexander E Gorbalenya, Ellie Ehrenfeld

Abstract readEvaluation Study
In one paragraph

Article in Virology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
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  6. Emergency Services of Viral RNAs: Repair and Remodeling.Microbiology and molecular biology reviews : MMBR · 2018
    Review
  7. Article
  8. Picornavirus--host interactions to construct viral secretory membranes.Progress in molecular biology and translational science · 2015
    Review
  9. Article
  10. Article
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  12. Article
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Natalya L TeterinaLaboratory of Infectious Diseases, NIAID, NIH, Bethesda, MD 20892, USA. nteterina@niaid.nih.gov
Chris Lauber
Kenneth S Jensen
Eric A Levenson
Alexander E Gorbalenya
Ellie Ehrenfeld
National Institutes of Health · USLeiden University Medical Center · NL

Funding

Molecular Biology of Picornavirus ReplicationZIAAI000816 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI EHRENFELD, ELVERA · 2009 to 2010
$1.4M
Intramural NIH HHS Z99 AI999999
6 · The paper itself

Abstract

Insertion of nucleotide sequences encoding "tags" that can be expressed in specific viral proteins during an infection is a useful strategy for purifying viral proteins and their functional complexes from infected cells and/or for visualizing the dynamics of their subcellular location over time. To identify regions in the poliovirus polyprotein that could potentially accommodate insertion of tags, transposon-mediated insertion mutagenesis was applied to the entire nonstructural protein-coding region of the poliovirus genome, followed by selection of genomes capable of generating infectious, viable viruses. This procedure allowed us to identify at least one site in each viral nonstructural protein, except protein 2C, in which a minimum of five amino acids could be inserted. The distribution of these sites is analyzed from the perspective of their protein structural context and from the perspective of virus evolution.

Indexed as

Mutagenesis, InsertionalAmino Acid SequenceBase SequenceDNA Transposable ElementsEvolution, MolecularHeLa CellsHumansModels, MolecularMolecular Sequence DataPoliovirusViral Nonstructural ProteinsDNA Transposable ElementsViral Nonstructural Proteins

Identifiers

PMID20971490
PMCPMC2993843
OpenAlexW2066275244

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.